RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	SLC35D1	Q9NTN3	355 aa		13.09	□□□□□ -0.31
CCND3-222	ENST00000612455	ATP6V0E1	O15342	81 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	GABARAP	O95166	117 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	SPDEF	O95238	335 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	APOA2	P02652	100 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	OR5H8	P0DN80	308 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	EGR2	P11161	476 aa	Predicted RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	PTHLH	P12272	177 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	VDAC1	P21796	283 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	NFYA	P23511	347 aa	Predicted RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	DUT	P33316	252 aa	Known RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	CBX5	P45973	191 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	CDX1	P47902	265 aa	Predicted RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	LGALS7	P47929	136 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	THBS3	P49746	956 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	RPS16	P62249	146 aa	Known RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	CX3CL1	P78423	397 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	TMEM177	Q53S58	311 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	C19orf54	Q5BKX5	351 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	KPRP	Q5T749	579 aa	Predicted RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	C18orf65	Q6ZTR6	163 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	SAMD12	Q8N8I0	201 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	MINDY2	Q8NBR6	621 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	ADTRP	Q96IZ2	230 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	TSNAX	Q99598	290 aa	Known RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	MRPS26	Q9BYN8	205 aa	Known RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	NAA50	Q9GZZ1	169 aa	Known RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	RBM7	Q9Y580	266 aa	Known RBP	13.08	□□□□□ -0.32
CCND3-222	ENST00000612455	NUBP2	Q9Y5Y2	271 aa		13.08	□□□□□ -0.32
CCND3-222	ENST00000612455		G3V318	75 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455		G3V4G9	280 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	WIPF1	O43516	503 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	SLC22A5	O76082	557 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	IGLV1-40	P01703	118 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	IGLV2-14	P01704	120 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	IGLV2-23	P01705	113 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	RPLP1	P05386	114 aa	Known RBP	13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	CRYGB	P07316	175 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	RRAS	P10301	218 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	PF4V1	P10720	104 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	PSMB8	P28062	276 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	LUM	P51884	338 aa	Predicted RBP	13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	NDP	Q00604	133 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	KIAA0141	Q14154	515 aa	Predicted RBP	13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	BEAN1	Q3B7T3	259 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	ZNF562	Q6V9R5	426 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	ETV3L	Q6ZN32	361 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	ZNF645	Q8N7E2	425 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	MYOZ3	Q8TDC0	251 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	FBXO7	Q9Y3I1	522 aa		13.07	□□□□□ -0.32
CCND3-222	ENST00000612455	IGKV1D-13	A0A0B4J2D9	117 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	LINC00473	A8K010	186 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	IGKV1-13	P0DP09	117 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	KHDC1L	Q5JSQ8	128 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	ZNF695	Q8IW36	515 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	BVES	Q8NE79	360 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	ACOT12	Q8WYK0	555 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	METTL1	Q9UBP6	276 aa	Known RBP	13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	ANAPC10	Q9UM13	185 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	WSB1	Q9Y6I7	421 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	TNC	P24821	2201 aa		13.06	□□□□□ -0.32
CCND3-222	ENST00000612455	TRAV41	A0A0B4J266	112 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	SRRM4	A7MD48	611 aa	Known RBP	13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	APOA1	P02647	267 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	NAT1	P18440	290 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	MYCNOS	P40205	109 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	RORC	P51449	518 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	TAS2R20	P59543	309 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	LCNL1	Q6ZST4	164 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	C1QL4	Q86Z23	238 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	LINC00482	Q8N8I6	264 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	SNAPC3	Q92966	411 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	P2RX4	Q99571	388 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	PARP11	Q9NR21	331 aa		13.05	□□□□□ -0.32
CCND3-222	ENST00000612455	RBMX2	Q9Y388	322 aa	Known RBP	13.05	□□□□□ -0.32
CCND3-222	ENST00000612455		J3QRK9	145 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	PF4	P02776	101 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	EIF4E	P06730	217 aa	Known RBP	13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	ARPC4	P59998	168 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	SSBP2	P81877	361 aa	Predicted RBP	13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	PLGLA	Q15195	96 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	MSMO1	Q15800	293 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	MRGPRG-AS1	Q2M3A8	158 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	AKIRIN2	Q53H80	203 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	OXLD1	Q5BKU9	147 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	TMEM69	Q5SWH9	247 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	GPR107	Q5VW38	600 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	C8orf86	Q6ZUL3	223 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	MRPL41	Q8IXM3	137 aa	Known RBP	13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	KLHL30-AS1	Q8NEE0	82 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	OR5AP2	Q8NGF4	316 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	GIMAP1	Q8WWP7	306 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	KLK15	Q9H2R5	256 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	NECAP2	Q9NVZ3	263 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	COMMD3	Q9UBI1	195 aa		13.04	□□□□□ -0.32
CCND3-222	ENST00000612455	SLC25A17	O43808	307 aa		13.03	□□□□□ -0.32
CCND3-222	ENST00000612455	CD33	P20138	364 aa		13.03	□□□□□ -0.32
CCND3-222	ENST00000612455	FCGR2C	P31995	323 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms