RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 IGHG4P01861 327 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 CNTFRP26992 372 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 CDX1P47902 265 aaPredicted RBP9.7□□□□□ -0.86
CBWD3-208ENST00000612050 RAB25P57735 213 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 ECSCRQ19T08 205 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 PYHIN1Q6K0P9 492 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 H1FOOQ8IZA3 346 aaPredicted RBP9.7□□□□□ -0.86
CBWD3-208ENST00000612050 YIPF6Q96EC8 236 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 HARBI1Q96MB7 349 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 NECAP2Q9NVZ3 263 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 SDHAF2Q9NX18 166 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 ANXA10Q9UJ72 324 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 OR2W1Q9Y3N9 320 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 MGAM2Q2M2H8 2515 aa9.7□□□□□ -0.86
CBWD3-208ENST00000612050 LINC01548A6NM66 108 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 PLXNB1O43157 2135 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 VMA21Q3ZAQ7 101 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 TMEM69Q5SWH9 247 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 C8orf86Q6ZUL3 223 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 ZNF645Q8N7E2 425 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 ZNF383Q8NA42 475 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 BEST4Q8NFU0 473 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 OR5H6Q8NGV6 325 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 AP3S1Q92572 193 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 BORCS5Q969J3 196 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 DCUN1D5Q9BTE7 237 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 WSB1Q9Y6I7 421 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 WNK1Q9H4A3 2382 aa9.69□□□□□ -0.86
CBWD3-208ENST00000612050 IGHV7-81A0A0B4J1V7 117 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 A0A1W2PN81 502 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 SLC25A17O43808 307 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 ACTL6BO94805 426 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 RPLP1P05386 114 aaKnown RBP9.68□□□□□ -0.86
CBWD3-208ENST00000612050 CHRNA7P36544 502 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 CX3CL1P78423 397 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 PSG5Q15238 335 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 OXLD1Q5BKU9 147 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 MZT2AQ6P582 158 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 UNQ5815/PRO19632Q6UWF5 114 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 ZNF562Q6V9R5 426 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 KCTD9Q7L273 389 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 PPP1R27Q86WC6 154 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 SAMD12Q8N8I0 201 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 WFDC9Q8NEX5 89 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 OR5M8Q8NGP6 311 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 C4orf3Q8WVX3 66 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 ACOT12Q8WYK0 555 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 CLCC1Q96S66 551 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
CBWD3-208ENST00000612050 A3GALT2U3KPV4 340 aa9.68□□□□□ -0.86
CBWD3-208ENST00000612050 J3QRK9 145 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 CCL24O00175 119 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 WIPF1O43516 503 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 XRCC3O43542 346 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 TUSC2O75896 110 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 CA2P00918 260 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 IGKV1-16P04430 117 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 IGLL1P15814 213 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 NFYAP23511 347 aaPredicted RBP9.67□□□□□ -0.86
CBWD3-208ENST00000612050 PSMB8P28062 276 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 RPS19P39019 145 aaKnown RBP9.67□□□□□ -0.86
CBWD3-208ENST00000612050 GNB1P62873 340 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 BEAN1Q3B7T3 259 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 ACTBL2Q562R1 376 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 RNF152Q8N8N0 203 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 BVESQ8NE79 360 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 OSR1Q8TAX0 266 aaPredicted RBP9.67□□□□□ -0.86
CBWD3-208ENST00000612050 ARPC1AQ92747 370 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 SLC25A46Q96AG3 418 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 SLC25A38Q96DW6 304 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 RITA1Q96K30 269 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 HSD17B10Q99714 261 aaKnown RBP9.67□□□□□ -0.86
CBWD3-208ENST00000612050 AIFM2Q9BRQ8 373 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 MRPS26Q9BYN8 205 aaKnown RBP9.67□□□□□ -0.86
CBWD3-208ENST00000612050 AUNIPQ9H7T9 357 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 ELF5Q9UKW6 265 aaPredicted RBP9.67□□□□□ -0.86
CBWD3-208ENST00000612050 VSIG4Q9Y279 399 aa9.67□□□□□ -0.86
CBWD3-208ENST00000612050 CRYZL1O95825 349 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 HLA-DQB1P01920 261 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 RORCP51449 518 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 HERV-K104P61576 105 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 CFHR3Q02985 330 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 FXYD3Q14802 87 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 AKIRIN2Q53H80 203 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 HOGA1Q86XE5 327 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 MRPL41Q8IXM3 137 aaKnown RBP9.66□□□□□ -0.86
CBWD3-208ENST00000612050 LINC00482Q8N8I6 264 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 GRPEL2Q8TAA5 225 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 TMEM68Q96MH6 324 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 CMTM3Q96MX0 182 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 PHB2Q99623 299 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 SLA2Q9H6Q3 261 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 ZNF355PQ9NSJ1 428 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 PKD1L1Q8TDX9 2849 aa9.66□□□□□ -0.86
CBWD3-208ENST00000612050 IGKV1D-8A0A087WSZ0 117 aa9.65□□□□□ -0.86
CBWD3-208ENST00000612050 TRIM64CA6NLI5 447 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms