RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 PSG5Q15238 335 aa15.09■□□□□ 0.01
TCF3-219ENST00000610756 REC114Q7Z4M0 266 aa15.09■□□□□ 0.01
TCF3-219ENST00000610756 MINDY2Q8NBR6 621 aa15.09■□□□□ 0.01
TCF3-219ENST00000610756 FLYWCH2Q96CP2 140 aaKnown RBP15.09■□□□□ 0.01
TCF3-219ENST00000610756 SLC25A38Q96DW6 304 aa15.09■□□□□ 0.01
TCF3-219ENST00000610756 P2RX4Q99571 388 aa15.09■□□□□ 0.01
TCF3-219ENST00000610756 TSNAXQ99598 290 aaKnown RBP15.09■□□□□ 0.01
TCF3-219ENST00000610756 PARP11Q9NR21 331 aa15.09■□□□□ 0.01
TCF3-219ENST00000610756 SPATA2Q9UM82 520 aa15.09■□□□□ 0.01
TCF3-219ENST00000610756 TGP01266 2768 aa15.08■□□□□ 0
TCF3-219ENST00000610756 TRAV41A0A0B4J266 112 aa15.08■□□□□ 0
TCF3-219ENST00000610756 SSX5O60225 188 aa15.08■□□□□ 0
TCF3-219ENST00000610756 SPDEFO95238 335 aa15.08■□□□□ 0
TCF3-219ENST00000610756 LGALS7P47929 136 aa15.08■□□□□ 0
TCF3-219ENST00000610756 CRIP2P52943 208 aaPredicted RBP15.08■□□□□ 0
TCF3-219ENST00000610756 GNG2P59768 71 aa15.08■□□□□ 0
TCF3-219ENST00000610756 PLGLAQ15195 96 aa15.08■□□□□ 0
TCF3-219ENST00000610756 CNIH2Q6PI25 160 aa15.08■□□□□ 0
TCF3-219ENST00000610756 ZNF562Q6V9R5 426 aa15.08■□□□□ 0
TCF3-219ENST00000610756 LCNL1Q6ZST4 164 aa15.08■□□□□ 0
TCF3-219ENST00000610756 NUDCD2Q8WVJ2 157 aa15.08■□□□□ 0
TCF3-219ENST00000610756 RBM7Q9Y580 266 aaKnown RBP15.08■□□□□ 0
TCF3-219ENST00000610756 NUBP2Q9Y5Y2 271 aa15.08■□□□□ 0
TCF3-219ENST00000610756 DNAH3Q8TD57 4116 aa15.08■□□□□ 0
TCF3-219ENST00000610756 TRAV18A0A075B6X5 111 aa15.07■□□□□ 0
TCF3-219ENST00000610756 RPS19P39019 145 aaKnown RBP15.07■□□□□ 0
TCF3-219ENST00000610756 FOXB2Q5VYV0 432 aa15.07■□□□□ 0
TCF3-219ENST00000610756 TMEM65Q6PI78 240 aa15.07■□□□□ 0
TCF3-219ENST00000610756 MYOZ3Q8TDC0 251 aa15.07■□□□□ 0
TCF3-219ENST00000610756 RAX2Q96IS3 184 aa15.07■□□□□ 0
TCF3-219ENST00000610756 DIABLOQ9NR28 239 aa15.07■□□□□ 0
TCF3-219ENST00000610756 SLC35D1Q9NTN3 355 aa15.07■□□□□ 0
TCF3-219ENST00000610756 NECAP2Q9NVZ3 263 aa15.07■□□□□ 0
TCF3-219ENST00000610756 METTL1Q9UBP6 276 aaKnown RBP15.07■□□□□ 0
TCF3-219ENST00000610756 CCL24O00175 119 aa15.06■□□□□ 0
TCF3-219ENST00000610756 EGR2P11161 476 aaPredicted RBP15.06■□□□□ 0
TCF3-219ENST00000610756 TGFBR1P36897 503 aa15.06■□□□□ 0
TCF3-219ENST00000610756 NDPQ00604 133 aa15.06■□□□□ 0
TCF3-219ENST00000610756 TMEM267Q0VDI3 215 aaPredicted RBP15.06■□□□□ 0
TCF3-219ENST00000610756 KIAA0141Q14154 515 aaPredicted RBP15.06■□□□□ 0
TCF3-219ENST00000610756 C19orf54Q5BKX5 351 aa15.06■□□□□ 0
TCF3-219ENST00000610756 C5orf30Q96GV9 206 aa15.06■□□□□ 0
TCF3-219ENST00000610756 UBE2E2Q96LR5 201 aa15.06■□□□□ 0
TCF3-219ENST00000610756 KLK15Q9H2R5 256 aa15.06■□□□□ 0
TCF3-219ENST00000610756 ANXA10Q9UJ72 324 aa15.06■□□□□ 0
TCF3-219ENST00000610756 OR2W1Q9Y3N9 320 aa15.06■□□□□ 0
TCF3-219ENST00000610756 HLA-DQB1P01920 261 aa15.05■□□□□ -0
TCF3-219ENST00000610756 RRASP10301 218 aa15.05■□□□□ -0
TCF3-219ENST00000610756 RAB9AP51151 201 aa15.05■□□□□ -0
TCF3-219ENST00000610756 AKIRIN2Q53H80 203 aa15.05■□□□□ -0
TCF3-219ENST00000610756 TCTEX1D1Q8N7M0 179 aa15.05■□□□□ -0
TCF3-219ENST00000610756 ZNF491Q8N8L2 437 aa15.05■□□□□ -0
TCF3-219ENST00000610756 C4orf3Q8WVX3 66 aa15.05■□□□□ -0
TCF3-219ENST00000610756 ADTRPQ96IZ2 230 aa15.05■□□□□ -0
TCF3-219ENST00000610756 MCRIP2Q9BUT9 160 aaKnown RBP15.05■□□□□ -0
TCF3-219ENST00000610756 FBXO7Q9Y3I1 522 aa15.05■□□□□ -0
TCF3-219ENST00000610756 SLC22A5O76082 557 aa15.04■□□□□ -0
TCF3-219ENST00000610756 PRB2P02812 416 aaPredicted RBP15.04■□□□□ -0
TCF3-219ENST00000610756 NFYAP23511 347 aaPredicted RBP15.04■□□□□ -0
TCF3-219ENST00000610756 DUTP33316 252 aaKnown RBP15.04■□□□□ -0
TCF3-219ENST00000610756 LUMP51884 338 aaPredicted RBP15.04■□□□□ -0
TCF3-219ENST00000610756 LSM3P62310 102 aaKnown RBP15.04■□□□□ -0
TCF3-219ENST00000610756 TMEM177Q53S58 311 aa15.04■□□□□ -0
TCF3-219ENST00000610756 PPP1R27Q86WC6 154 aa15.04■□□□□ -0
TCF3-219ENST00000610756 DDB2Q92466 427 aa15.04■□□□□ -0
TCF3-219ENST00000610756 S100A16Q96FQ6 103 aaKnown RBP15.04■□□□□ -0
TCF3-219ENST00000610756 CLCC1Q96S66 551 aa15.04■□□□□ -0
TCF3-219ENST00000610756 GPR61Q9BZJ8 451 aa15.04■□□□□ -0
TCF3-219ENST00000610756 AUNIPQ9H7T9 357 aa15.04■□□□□ -0
TCF3-219ENST00000610756 XRCC3O43542 346 aa15.03■□□□□ -0
TCF3-219ENST00000610756 SLC25A17O43808 307 aa15.03■□□□□ -0
TCF3-219ENST00000610756 IGLV2-23P01705 113 aa15.03■□□□□ -0
TCF3-219ENST00000610756 CRYGBP07316 175 aa15.03■□□□□ -0
TCF3-219ENST00000610756 CBX3Q13185 183 aa15.03■□□□□ -0
TCF3-219ENST00000610756 RTL8BQ17RB0 113 aa15.03■□□□□ -0
TCF3-219ENST00000610756 HOGA1Q86XE5 327 aa15.03■□□□□ -0
TCF3-219ENST00000610756 ZNF645Q8N7E2 425 aa15.03■□□□□ -0
TCF3-219ENST00000610756 BVESQ8NE79 360 aa15.03■□□□□ -0
TCF3-219ENST00000610756 DUX3Q96PT4 197 aa15.03■□□□□ -0
TCF3-219ENST00000610756 FUNDC2Q9BWH2 189 aa15.03■□□□□ -0
TCF3-219ENST00000610756 FOXA2Q9Y261 457 aaPredicted RBP15.03■□□□□ -0
TCF3-219ENST00000610756 VSIG4Q9Y279 399 aa15.03■□□□□ -0
TCF3-219ENST00000610756 SOX15O60248 233 aa15.02■□□□□ -0
TCF3-219ENST00000610756 CA2P00918 260 aa15.02■□□□□ -0
TCF3-219ENST00000610756 RUNX1Q01196 453 aa15.02■□□□□ -0
TCF3-219ENST00000610756 ECSCRQ19T08 205 aa15.02■□□□□ -0
TCF3-219ENST00000610756 BEST4Q8NFU0 473 aa15.02■□□□□ -0
TCF3-219ENST00000610756 SLC25A46Q96AG3 418 aa15.02■□□□□ -0
TCF3-219ENST00000610756 A0A1W2PN81 502 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 SRRM4A7MD48 611 aaKnown RBP15.01□□□□□ -0.01
TCF3-219ENST00000610756 LINC00473A8K010 186 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 I3L521 148 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 J3QRK9 145 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 SHOXO15266 292 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 TUSC2O75896 110 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 CHRNA7P36544 502 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 EGFEM1PQ0D2K5 195 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 FXYD3Q14802 87 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 DEFB136Q30KP8 78 aa15.01□□□□□ -0.01
TCF3-219ENST00000610756 GVQW1Q8N7I0 195 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms