RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 CYYR1Q96J86 154 aa13.09□□□□□ -0.31
CHMP4A-211ENST00000609024 HARBI1Q96MB7 349 aa13.09□□□□□ -0.31
CHMP4A-211ENST00000609024 AGMATQ9BSE5 352 aa13.09□□□□□ -0.31
CHMP4A-211ENST00000609024 TMEM59Q9BXS4 323 aa13.09□□□□□ -0.31
CHMP4A-211ENST00000609024 PARP12Q9H0J9 701 aaKnown RBP13.09□□□□□ -0.31
CHMP4A-211ENST00000609024 OR1A1Q9P1Q5 309 aa13.09□□□□□ -0.31
CHMP4A-211ENST00000609024 TRBV5-7A0A0A0MS05 114 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 PNMA8CA0A1B0GUJ8 204 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 M0R1X1 148 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 SHOXO15266 292 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 NDUFB8O95169 186 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 SNRPBP14678 240 aaKnown RBP13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 MAPK3P27361 379 aaPredicted RBP13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 EXOSC2Q13868 293 aaKnown RBP13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 DEFB114Q30KQ6 69 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 C9orf16Q9BUW7 83 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 GGTLC1Q9BX51 225 aa13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 TECRQ9NZ01 308 aaKnown RBP13.08□□□□□ -0.32
CHMP4A-211ENST00000609024 LOC102724200A0A096LPH7 203 aaPredicted RBP13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 MSGN1A6NI15 193 aa13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 ATP5HO75947 161 aa13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 OR9G9P0C7N8 305 aa13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 TAS2R43P59537 309 aa13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 RPS11P62280 158 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 HLA-DRB3P79483 266 aa13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 RHOGP84095 191 aa13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 SMN1Q16637 294 aaKnown RBP13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 FAM209BQ5JX69 171 aa13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 ZNF555Q8NEP9 628 aa13.07□□□□□ -0.32
CHMP4A-211ENST00000609024 NAPSAO96009 420 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 LALBAP00709 142 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 FOLR2P14207 255 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 KIR2DS2P43631 304 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 MAP2K4P45985 399 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 LINC00205P59089 165 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 RPS27AP62979 156 aaKnown RBP13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 TNXAQ16473 311 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 RTL8BQ17RB0 113 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 ANKRD55Q3KP44 614 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 OR10K2Q6IF99 312 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 ZNF880Q6PDB4 577 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 CEMP1Q6PRD7 247 aaPredicted RBP13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 OR52B4Q8NGK2 314 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 KCNG3Q8TAE7 436 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 APH1BQ8WW43 257 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 WDR89Q96FK6 387 aaPredicted RBP13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 DERL3Q96Q80 235 aa13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 DIMT1Q9UNQ2 313 aaKnown RBP13.06□□□□□ -0.32
CHMP4A-211ENST00000609024 BMPR1BO00238 502 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 ACTL6BO94805 426 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 HTR2CP28335 458 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 VMA21Q3ZAQ7 101 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 GLT8D1Q68CQ7 371 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 ADAD2Q8NCV1 583 aaKnown RBP13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 ACOT12Q8WYK0 555 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 PTX4Q96A99 478 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 PGLYRP3Q96LB9 341 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 AKIP1Q9NQ31 210 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 CLEC2DQ9UHP7 191 aa13.05□□□□□ -0.32
CHMP4A-211ENST00000609024 A0A0J9YWU9 116 aa13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 C2orf70A6NJV1 201 aa13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 SSBP2P81877 361 aaPredicted RBP13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 TAGLNQ01995 201 aaKnown RBP13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 TTC23Q5W5X9 447 aa13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 ZFP1Q6P2D0 407 aa13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 RPP25LQ8N5L8 163 aaKnown RBP13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 RDH8Q9NYR8 311 aa13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 ZNF230Q9UIE0 474 aaPredicted RBP13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 FRAS1Q86XX4 4008 aa13.04□□□□□ -0.32
CHMP4A-211ENST00000609024 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 CREBL2O60519 120 aaPredicted RBP13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 GGCTO75223 188 aaKnown RBP13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 PROP1O75360 226 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 IGLV2-23P01705 113 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 SCTP09683 121 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 TMEM217Q8N7C4 229 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 GGHQ92820 318 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 NICN1Q9BSH3 213 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 URM1Q9BTM9 101 aaKnown RBP13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 C12orf4Q9NQ89 552 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 ZC4H2Q9NQZ6 224 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 AK3Q9UIJ7 227 aa13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 RBM7Q9Y580 266 aaKnown RBP13.03□□□□□ -0.32
CHMP4A-211ENST00000609024 TRBV6-6A0A0A6YYG2 114 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 PRH1P02810 166 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 CRYGBP07316 175 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 RRASP10301 218 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 CELP19835 753 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 MRPS15P82914 257 aaKnown RBP13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 TPBGQ13641 420 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 LYG2Q86SG7 212 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 C10orf67Q8IYJ2 551 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 NECAP1Q8NC96 275 aa13.02□□□□□ -0.33
CHMP4A-211ENST00000609024 SRSF12Q8WXF0 261 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms