RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 RAB1BQ9H0U4 201 aa0.47□□□□□ -2.33
HDDC2-207ENST00000608532 CA7P43166 264 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 TNNC1P63316 161 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 XIAPP98170 497 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 Q1T7F1 81 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 ATP5L2Q7Z4Y8 100 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 Q8N2B8 174 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 LFNGQ8NES3 379 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 OR1L8Q8NGR8 309 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 LRRC20Q8TCA0 184 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 TMEM239Q8WW34 195 aa0.46□□□□□ -2.34
HDDC2-207ENST00000608532 TMA16Q96EY4 203 aaKnown RBP0.46□□□□□ -2.34
HDDC2-207ENST00000608532 ARFGEF3Q5TH69 2177 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 MRASO14807 208 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 ORC5O43913 435 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 ARL6IP5O75915 188 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 NQO2P16083 231 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 OR10J1P30954 320 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 RBM11P57052 281 aaKnown RBP0.45□□□□□ -2.34
HDDC2-207ENST00000608532 HERVK_113P63121 156 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 LYZL1Q6UWQ5 148 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 EIF5A2Q9GZV4 153 aaKnown RBP0.45□□□□□ -2.34
HDDC2-207ENST00000608532 OR51B6Q9H340 312 aa0.45□□□□□ -2.34
HDDC2-207ENST00000608532 SCN2BO60939 215 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 HBZP02008 142 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 DEFA4P12838 97 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 AGTR1P30556 359 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 RPL27AP46776 148 aaKnown RBP0.44□□□□□ -2.34
HDDC2-207ENST00000608532 GABRA2P47869 451 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 ELOBQ15370 118 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 ARHGAP11BQ3KRB8 267 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 MESTQ5EB52 335 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 SFRP2Q96HF1 295 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 TTTY13Q9BZ97 58 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 ENPP5Q9UJA9 477 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 POLR3HQ9Y535 204 aaPredicted RBP0.44□□□□□ -2.34
HDDC2-207ENST00000608532 TIMM9Q9Y5J7 89 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 CACNA1BQ00975 2339 aa0.44□□□□□ -2.34
HDDC2-207ENST00000608532 PTPRBP23467 1997 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 IGHV1-18A0A0C4DH31 117 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 NPPAP01160 153 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 LIMS3P0CW19 117 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 LIMS4P0CW20 117 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 CD79BP40259 229 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 FAM173BQ6P4H8 233 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 SCGB1D4Q6XE38 83 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 KRTAP19-3Q7Z4W3 81 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 BAP18Q8IXM2 172 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 LRRC34Q8IZ02 419 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 OR13C8Q8NGS7 320 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 CCDC12Q8WUD4 166 aaPredicted RBP0.43□□□□□ -2.34
HDDC2-207ENST00000608532 TMEM56Q96MV1 263 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 NMNAT3Q96T66 252 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 UGT2B28Q9BY64 529 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 WDR90Q96KV7 1748 aa0.43□□□□□ -2.34
HDDC2-207ENST00000608532 TRAPPC13A5PLN9 417 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 SULT1C2O00338 296 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 SGCEO43556 437 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 UGT2B11O75310 529 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 TNFAIP8O95379 198 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 CST4P01036 141 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 TPI1P60174 286 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 BTN3A2P78410 334 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 SPATA31B1PQ5VZV4 182 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 C1orf174Q8IYL3 243 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 ST13P4Q8IZP2 240 aaPredicted RBP0.42□□□□□ -2.34
HDDC2-207ENST00000608532 DYNAPQ8N1N2 210 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 FAM19A2Q8N3H0 131 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 PPWD1Q96BP3 646 aaKnown RBP0.42□□□□□ -2.34
HDDC2-207ENST00000608532 FAM210AQ96ND0 272 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 OR7D2Q96RA2 312 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 IMMP2LQ96T52 175 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 GNB1LQ9BYB4 327 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 UBQLN4Q9NRR5 601 aa0.42□□□□□ -2.34
HDDC2-207ENST00000608532 A0A0D9SEW6 157 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 LIN7AO14910 233 aaPredicted RBP0.41□□□□□ -2.34
HDDC2-207ENST00000608532 NUP62P37198 522 aaPredicted RBP0.41□□□□□ -2.34
HDDC2-207ENST00000608532 CRATP43155 626 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 REG1BP48304 166 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 EMP1P54849 157 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 DAD1P61803 113 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 TMEM249Q2WGJ8 235 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 ZNF675Q8TD23 568 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 TMEM222Q9H0R3 208 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 MRM2Q9UI43 246 aaKnown RBP0.41□□□□□ -2.34
HDDC2-207ENST00000608532 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.41□□□□□ -2.34
HDDC2-207ENST00000608532 KMT2DO14686 5537 aa0.41□□□□□ -2.34
HDDC2-207ENST00000608532 F5H5K5 113 aa0.4□□□□□ -2.35
HDDC2-207ENST00000608532 GEMIN2O14893 280 aaKnown RBP0.4□□□□□ -2.35
HDDC2-207ENST00000608532 CREBL2O60519 120 aaPredicted RBP0.4□□□□□ -2.35
HDDC2-207ENST00000608532 PSMB8P28062 276 aa0.4□□□□□ -2.35
HDDC2-207ENST00000608532 CA5AP35218 305 aa0.4□□□□□ -2.35
HDDC2-207ENST00000608532 MIAQ16674 131 aa0.4□□□□□ -2.35
HDDC2-207ENST00000608532 RNASE6Q93091 150 aaKnown RBP0.4□□□□□ -2.35
HDDC2-207ENST00000608532 TMEM208Q9BTX3 173 aa0.4□□□□□ -2.35
HDDC2-207ENST00000608532 REG4Q9BYZ8 158 aa0.4□□□□□ -2.35
HDDC2-207ENST00000608532 SNURFQ9Y675 71 aa0.4□□□□□ -2.35
HDDC2-207ENST00000608532 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms