RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 Q8N2B8 174 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 C3orf56Q8N813 242 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 ZNF383Q8NA42 475 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 TMEM229BQ8NBD8 167 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 ZBTB34Q8NCN2 500 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 SECTM1Q8WVN6 248 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 RASL11BQ9BPW5 248 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 SOSTQ9BQB4 213 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 ZNF2Q9BSG1 426 aaPredicted RBP11.37□□□□□ -0.59
CTSA-219ENST00000607841 RBMX2Q9Y388 322 aaKnown RBP11.37□□□□□ -0.59
CTSA-219ENST00000607841 RNF114Q9Y508 228 aa11.37□□□□□ -0.59
CTSA-219ENST00000607841 IGKV1D-13A0A0B4J2D9 117 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 A6NHS1 94 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 GSTZ1O43708 216 aaPredicted RBP11.36□□□□□ -0.59
CTSA-219ENST00000607841 CSF1P09603 554 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 IGKV1-13P0DP09 117 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 RRASP10301 218 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 FXYD4P59646 89 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 MMDQ15546 238 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 RTL8BQ17RB0 113 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 ABCA11PQ4W5N1 156 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 RNASE10Q5GAN6 216 aaKnown RBP11.36□□□□□ -0.59
CTSA-219ENST00000607841 C5orf56Q8N8D9 126 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 HSD17B10Q99714 261 aaKnown RBP11.36□□□□□ -0.59
CTSA-219ENST00000607841 SLC5A7Q9GZV3 580 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 SLC35D1Q9NTN3 355 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 KIAA1456Q9P272 454 aa11.36□□□□□ -0.59
CTSA-219ENST00000607841 PEX14O75381 377 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 CD3DP04234 171 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 AMY1AP04745 511 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 AMY2AP04746 511 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 DUTP33316 252 aaKnown RBP11.35□□□□□ -0.59
CTSA-219ENST00000607841 PYDC2Q56P42 97 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 C9orf152Q5JTZ5 239 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 ZNF660Q6AZW8 331 aaPredicted RBP11.35□□□□□ -0.59
CTSA-219ENST00000607841 LPCAT3Q6P1A2 487 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 ZNF66Q6ZN08 573 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 CCDC190Q86UF4 302 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 ARRDC1Q8N5I2 433 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 OR6Q1Q8NGQ2 317 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 MOB3AQ96BX8 217 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
CTSA-219ENST00000607841 CCL28Q9NRJ3 127 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 PLSCR3Q9NRY6 295 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 LIN7CQ9NUP9 197 aaKnown RBP11.35□□□□□ -0.59
CTSA-219ENST00000607841 PRELID3BQ9Y3B1 194 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 COL6A5A8TX70 2615 aa11.35□□□□□ -0.59
CTSA-219ENST00000607841 HAX1O00165 279 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 NBR2O15453 112 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 IGLV2-14P01704 120 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 ETV6P41212 452 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 VDAC2P45880 294 aaPredicted RBP11.34□□□□□ -0.59
CTSA-219ENST00000607841 F2RL1P55085 397 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 PROK1P58294 105 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
CTSA-219ENST00000607841 MEF2DQ14814 521 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 STEAP1BQ6NZ63 245 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 Q8N9W7 124 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 NPBQ8NG41 125 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 C5orf30Q96GV9 206 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 TSNAXQ99598 290 aaKnown RBP11.34□□□□□ -0.59
CTSA-219ENST00000607841 ZNF747Q9BV97 191 aa11.34□□□□□ -0.59
CTSA-219ENST00000607841 M0QYG6 137 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 RAB3DO95716 219 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 CD74P04233 296 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 S100GP29377 79 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 LGALS7P47929 136 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 LINC00205P59089 165 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 CATR1Q13166 79 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 KCTD9Q7L273 389 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 CMTM1Q8IZ96 169 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 Q8N402 240 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 MFSD4AQ8N468 514 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 FAM71E2Q8N5Q1 922 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 BVESQ8NE79 360 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 TCTEX1D2Q8WW35 142 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 DDB2Q92466 427 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 RITA1Q96K30 269 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 THAP7Q9BT49 309 aaPredicted RBP11.33□□□□□ -0.6
CTSA-219ENST00000607841 TINAGL1Q9GZM7 467 aaPredicted RBP11.33□□□□□ -0.6
CTSA-219ENST00000607841 SIGLEC9Q9Y336 463 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 V9GYH0 126 aa11.33□□□□□ -0.6
CTSA-219ENST00000607841 SH2D7A6NKC9 451 aaPredicted RBP11.32□□□□□ -0.6
CTSA-219ENST00000607841 LINC00473A8K010 186 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 DISC1C4P0D8 188 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 KCNAB3O43448 404 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 NDUFA3O95167 84 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 SPDEFO95238 335 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 AKAIN1P0CW23 69 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 GNRHRP30968 328 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 UCP3P55916 312 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 AP3S2P59780 193 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 PLGLAQ15195 96 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 C5orf64Q2M2E5 130 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 LIN54Q6MZP7 749 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 SHISA2Q6UWI4 295 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 Q6ZS46 218 aa11.32□□□□□ -0.6
CTSA-219ENST00000607841 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms