RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ADTRPQ96IZ2 230 aa13.02□□□□□ -0.33
LINC00240-203ENST00000606878 COMMD3Q9UBI1 195 aa13.02□□□□□ -0.33
LINC00240-203ENST00000606878 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 SMIM31A0A1B0GVY4 71 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 HLA-DQB1P01920 261 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 IGKV1-16P04430 117 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 RRASP10301 218 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 SLC6A1P30531 599 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 DEFA6Q01524 100 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 FOXE3Q13461 319 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 RTL8BQ17RB0 113 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 TMEM69Q5SWH9 247 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 GPR107Q5VW38 600 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 GPR141Q7Z602 305 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 GVQW1Q8N7I0 195 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 WFDC9Q8NEX5 89 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 CMTM3Q96MX0 182 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 PARP11Q9NR21 331 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
LINC00240-203ENST00000606878 WSB1Q9Y6I7 421 aa13.01□□□□□ -0.33
LINC00240-203ENST00000606878 NUDT19A8MXV4 375 aa13□□□□□ -0.33
LINC00240-203ENST00000606878 FCN1O00602 326 aa13□□□□□ -0.33
LINC00240-203ENST00000606878 IGHG4P01861 327 aa13□□□□□ -0.33
LINC00240-203ENST00000606878 PF4P02776 101 aa13□□□□□ -0.33
LINC00240-203ENST00000606878 CX3CL1P78423 397 aa13□□□□□ -0.33
LINC00240-203ENST00000606878 CTF1Q16619 201 aa13□□□□□ -0.33
LINC00240-203ENST00000606878 BVESQ8NE79 360 aa13□□□□□ -0.33
LINC00240-203ENST00000606878 NAA50Q9GZZ1 169 aaKnown RBP13□□□□□ -0.33
LINC00240-203ENST00000606878 TRAV41A0A0B4J266 112 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 ATP6V0E1O15342 81 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 GABARAPO95166 117 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 SPDEFO95238 335 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 APOA1P02647 267 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 RPLP1P05386 114 aaKnown RBP12.99□□□□□ -0.33
LINC00240-203ENST00000606878 PTHLHP12272 177 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 CD33P20138 364 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 FCGR2CP31995 323 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 DUTP33316 252 aaKnown RBP12.99□□□□□ -0.33
LINC00240-203ENST00000606878 PRSS3P35030 304 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 ALDH3B2P48448 385 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 CFHR3Q02985 330 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 TMEM267Q0VDI3 215 aaPredicted RBP12.99□□□□□ -0.33
LINC00240-203ENST00000606878 MZT2AQ6P582 158 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 TMEM65Q6PI78 240 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 ZNF695Q8IW36 515 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 ZNF645Q8N7E2 425 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 RNF152Q8N8N0 203 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 IFT46Q9NQC8 304 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 NECAP2Q9NVZ3 263 aa12.99□□□□□ -0.33
LINC00240-203ENST00000606878 G3V318 75 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 SHOXO15266 292 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 TUSC2O75896 110 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 FCER2P06734 321 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 PPIFP30405 207 aaKnown RBP12.98□□□□□ -0.33
LINC00240-203ENST00000606878 CDX1P47902 265 aaPredicted RBP12.98□□□□□ -0.33
LINC00240-203ENST00000606878 TAS2R20P59543 309 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 TMEM177Q53S58 311 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 C1QL4Q86Z23 238 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 OR5AP2Q8NGF4 316 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 ABHD5Q8WTS1 349 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 AP3S1Q92572 193 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 C5orf30Q96GV9 206 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 MRPS7Q9Y2R9 242 aaKnown RBP12.98□□□□□ -0.33
LINC00240-203ENST00000606878 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
LINC00240-203ENST00000606878 MEIS3P1A6NDR6 274 aa12.97□□□□□ -0.33
LINC00240-203ENST00000606878 SLC25A17O43808 307 aa12.97□□□□□ -0.33
LINC00240-203ENST00000606878 ZNF182P17025 639 aaPredicted RBP12.97□□□□□ -0.33
LINC00240-203ENST00000606878 MYCNOSP40205 109 aa12.97□□□□□ -0.33
LINC00240-203ENST00000606878 RBMX2Q9Y388 322 aaKnown RBP12.97□□□□□ -0.33
LINC00240-203ENST00000606878 PRELID3BQ9Y3B1 194 aa12.97□□□□□ -0.33
LINC00240-203ENST00000606878 NUBP2Q9Y5Y2 271 aa12.97□□□□□ -0.33
LINC00240-203ENST00000606878 MEGF8Q7Z7M0 2845 aa12.97□□□□□ -0.33
LINC00240-203ENST00000606878 IGKV1D-13A0A0B4J2D9 117 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 LINC00473A8K010 186 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 G3V4G9 280 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 CNIH1O95406 144 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 IGLV2-23P01705 113 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 EIF4EP06730 217 aaKnown RBP12.96□□□□□ -0.33
LINC00240-203ENST00000606878 IGKV1-13P0DP09 117 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 PSMB8P28062 276 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 CDK10Q15131 360 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 SAMD5Q5TGI4 173 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 LCNL1Q6ZST4 164 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 C18orf65Q6ZTR6 163 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 C8orf86Q6ZUL3 223 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 PPP1R27Q86WC6 154 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 MINDY2Q8NBR6 621 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 GIMAP1Q8WWP7 306 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 DDB2Q92466 427 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 HARBI1Q96MB7 349 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 HSD17B10Q99714 261 aaKnown RBP12.96□□□□□ -0.33
LINC00240-203ENST00000606878 DCUN1D5Q9BTE7 237 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 A3GALT2U3KPV4 340 aa12.96□□□□□ -0.33
LINC00240-203ENST00000606878 HPGDSO60760 199 aa12.95□□□□□ -0.34
LINC00240-203ENST00000606878 CRYZL1O95825 349 aa12.95□□□□□ -0.34
LINC00240-203ENST00000606878 CA2P00918 260 aa12.95□□□□□ -0.34
LINC00240-203ENST00000606878 IGLV1-40P01703 118 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms