RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ZNF702PQ9H963 129 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 TAS2R8Q9NYW2 309 aa11.06□□□□□ -0.64
RNF40-212ENST00000602784 APOA2P02652 100 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 CD74P04233 296 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 MDKP21741 143 aaPredicted RBP11.05□□□□□ -0.64
RNF40-212ENST00000602784 DUTP33316 252 aaKnown RBP11.05□□□□□ -0.64
RNF40-212ENST00000602784 THBS3P49746 956 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 TAS2R19P59542 299 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 HERV-K104P61576 105 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 RNASE12Q5GAN4 147 aaKnown RBP11.05□□□□□ -0.64
RNF40-212ENST00000602784 SPANXN2Q5MJ10 180 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 GLDNQ6ZMI3 551 aaPredicted RBP11.05□□□□□ -0.64
RNF40-212ENST00000602784 PDPNQ86YL7 162 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 C5orf56Q8N8D9 126 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 NPBQ8NG41 125 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 MOB3AQ96BX8 217 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 C5orf30Q96GV9 206 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 HSD17B10Q99714 261 aaKnown RBP11.05□□□□□ -0.64
RNF40-212ENST00000602784 ZNF2Q9BSG1 426 aaPredicted RBP11.05□□□□□ -0.64
RNF40-212ENST00000602784 V9GYH0 126 aa11.05□□□□□ -0.64
RNF40-212ENST00000602784 NCBP2LA6PVI3 153 aaKnown RBP11.04□□□□□ -0.64
RNF40-212ENST00000602784 H7C2Y5 167 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 J3QRK9 145 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 CD3DP04234 171 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 CSF1P09603 554 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 RRASP10301 218 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 TSPAN5P62079 268 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 EIF4EBP1Q13541 118 aaPredicted RBP11.04□□□□□ -0.64
RNF40-212ENST00000602784 RNASE10Q5GAN6 216 aaKnown RBP11.04□□□□□ -0.64
RNF40-212ENST00000602784 C12orf54Q6X4T0 127 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 LINC00299Q6ZSB3 139 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 TMEM17Q86X19 198 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 ARRDC1Q8N5I2 433 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 Q8N9W7 124 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 SECTM1Q8WVN6 248 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 DDB2Q92466 427 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 SLC5A7Q9GZV3 580 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 LIN7CQ9NUP9 197 aaKnown RBP11.04□□□□□ -0.64
RNF40-212ENST00000602784 RNF114Q9Y508 228 aa11.04□□□□□ -0.64
RNF40-212ENST00000602784 IFNA6P05013 189 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 F2RL1P55085 397 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 UCP3P55916 312 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 PROK1P58294 105 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 LINC00205P59089 165 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 FXYD4P59646 89 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 MEF2DQ14814 521 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 RTL8BQ17RB0 113 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 ABCA11PQ4W5N1 156 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 STEAP1BQ6NZ63 245 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 LPCAT3Q6P1A2 487 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 ZNF66Q6ZN08 573 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 FAM71E2Q8N5Q1 922 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 FLYWCH2Q96CP2 140 aaKnown RBP11.03□□□□□ -0.64
RNF40-212ENST00000602784 RITA1Q96K30 269 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 CCL28Q9NRJ3 127 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 SLC35D1Q9NTN3 355 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 PRELID3BQ9Y3B1 194 aa11.03□□□□□ -0.64
RNF40-212ENST00000602784 ANKRD20A5PA0PJZ0 165 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 LINC00473A8K010 186 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 M0QYG6 137 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 NBR2O15453 112 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 NDUFA3O95167 84 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 RAB3DO95716 219 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 IGKV1-16P04430 117 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 GNRHRP30968 328 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 LGALS7P47929 136 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 CBX3Q13185 183 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 MMDQ15546 238 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 ZNF79Q15937 498 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 PYDC2Q56P42 97 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 Q6ZS46 218 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 C3orf56Q8N813 242 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 BVESQ8NE79 360 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 TSNAXQ99598 290 aaKnown RBP11.02□□□□□ -0.65
RNF40-212ENST00000602784 RASL11BQ9BPW5 248 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 THAP7Q9BT49 309 aaPredicted RBP11.02□□□□□ -0.65
RNF40-212ENST00000602784 ZNF747Q9BV97 191 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 TINAGL1Q9GZM7 467 aaPredicted RBP11.02□□□□□ -0.65
RNF40-212ENST00000602784 SERTAD4Q9NUC0 356 aa11.02□□□□□ -0.65
RNF40-212ENST00000602784 SPDEFO95238 335 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 IGHG2P01859 326 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 AKAIN1P0CW23 69 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 C5orf64Q2M2E5 130 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 CNPY1Q3B7I2 92 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 TMEM177Q53S58 311 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 AADACL3Q5VUY0 350 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 ZNF818PQ6ZRF7 136 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 KCTD9Q7L273 389 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 LHFPL1Q86WI0 220 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 CMTM1Q8IZ96 169 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 Q8N402 240 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 MFSD4AQ8N468 514 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 DEDD2Q8WXF8 326 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 KIAA1456Q9P272 454 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 SIGLEC9Q9Y336 463 aa11.01□□□□□ -0.65
RNF40-212ENST00000602784 RRHO14718 337 aa11□□□□□ -0.65
RNF40-212ENST00000602784 CNTFRP26992 372 aa11□□□□□ -0.65
RNF40-212ENST00000602784 KIR2DS2P43631 304 aa11□□□□□ -0.65
RNF40-212ENST00000602784 VDAC2P45880 294 aaPredicted RBP11□□□□□ -0.65
RNF40-212ENST00000602784 AP3S2P59780 193 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms