RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CNIH1O95406 144 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 HSMCR30P0CW71 290 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 IGHV4-30-4P0DP06 118 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 LYL1P12980 280 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 CLDN12P56749 244 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 RPS25P62851 125 aaKnown RBP10.09□□□□□ -0.79
RPS28-204ENST00000602140 IRF3Q14653 427 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 RAB11BQ15907 218 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 ANKRD13BQ86YJ7 626 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 Q8N1Y9 231 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 POC5Q8NA72 575 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 OR5T1Q8NG75 326 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 SLC35D1Q9NTN3 355 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 STUB1Q9UNE7 303 aa10.09□□□□□ -0.79
RPS28-204ENST00000602140 DYNC2H1Q8NCM8 4307 aaKnown RBP10.08□□□□□ -0.8
RPS28-204ENST00000602140 ANKRD34BA5PLL1 514 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 ARL6IP5O75915 188 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 IGLV1-51P01701 117 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 ZP3P21754 424 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 SSBP2P81877 361 aaPredicted RBP10.08□□□□□ -0.8
RPS28-204ENST00000602140 PJVKQ0ZLH3 352 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 TPBGQ13641 420 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 C2orf76Q3KRA6 126 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 PLAC9Q5JTB6 97 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.08□□□□□ -0.8
RPS28-204ENST00000602140 OR56B1Q8NGI3 324 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 FAM3DQ96BQ1 224 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 PALMDQ9NP74 551 aa10.08□□□□□ -0.8
RPS28-204ENST00000602140 TENM2Q9NT68 2774 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 A0A0G2JLM5 398 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 H3BUA1 57 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 BET1O15155 118 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 LDLRAD4O15165 306 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 DENRO43583 198 aaKnown RBP10.07□□□□□ -0.8
RPS28-204ENST00000602140 IGLV2-23P01705 113 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 CD3GP09693 182 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 CALRP27797 417 aaKnown RBP10.07□□□□□ -0.8
RPS28-204ENST00000602140 TRAM1Q15629 374 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 OR4A4PQ8NGN8 299 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 CITED4Q96RK1 184 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 TM2D3Q9BRN9 247 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 OR2D2Q9H210 308 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 SDHAF2Q9NX18 166 aa10.07□□□□□ -0.8
RPS28-204ENST00000602140 DNAH7Q8WXX0 4024 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 TMEM272A0A1B0GTI8 110 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 FABP7O15540 132 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 CRYGBP07316 175 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 LGALS7P47929 136 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 SERPINB10P48595 397 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 MRPS15P82914 257 aaKnown RBP10.06□□□□□ -0.8
RPS28-204ENST00000602140 DEFA5Q01523 94 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 PLA2G7Q13093 441 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 KLF5Q13887 457 aaPredicted RBP10.06□□□□□ -0.8
RPS28-204ENST00000602140 MOGAT2Q3SYC2 334 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 IGSF11Q5DX21 431 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 SGPP2Q8IWX5 399 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 HARBI1Q96MB7 349 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 C19orf73Q9NVV2 129 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 GAR1Q9NY12 217 aaKnown RBP10.06□□□□□ -0.8
RPS28-204ENST00000602140 KCNK7Q9Y2U2 307 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 TPRKBQ9Y3C4 175 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 V9GY05 133 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 SACSQ9NZJ4 4579 aa10.06□□□□□ -0.8
RPS28-204ENST00000602140 A8MZ25 164 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 SHOXO15266 292 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 RGS10O43665 173 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 FCGR3AP08637 254 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 GSTT2P0CG29 244 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 GSTT2BP0CG30 244 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 PSMA1P25786 263 aaKnown RBP10.05□□□□□ -0.8
RPS28-204ENST00000602140 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 FABP5Q01469 135 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 MLLT11Q13015 90 aaPredicted RBP10.05□□□□□ -0.8
RPS28-204ENST00000602140 HES5Q5TA89 166 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 ZFAND6Q6FIF0 208 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 BVESQ8NE79 360 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 OR9G4Q8NGQ1 327 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 OR10J5Q8NHC4 309 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 RAB3CQ96E17 227 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 TMEM68Q96MH6 324 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 CABLES2Q9BTV7 478 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 TINAGL1Q9GZM7 467 aaPredicted RBP10.05□□□□□ -0.8
RPS28-204ENST00000602140 CCDC90BQ9GZT6 254 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 DUSP21Q9H596 190 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 RAB22AQ9UL26 194 aa10.05□□□□□ -0.8
RPS28-204ENST00000602140 TRBV6-7A0A0A0MS04 114 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 SRRM4A7MD48 611 aaKnown RBP10.04□□□□□ -0.8
RPS28-204ENST00000602140 TRBV12-3P01733 135 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 APELAP0DMC3 54 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 AADACP22760 399 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 RANBP1P43487 201 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 PSMD7P51665 324 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 AQP4P55087 323 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 CBX3Q13185 183 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 TMEM177Q53S58 311 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 ZNF343Q6P1L6 599 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 IL34Q6ZMJ4 242 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 MAFIPQ8WZ33 124 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 PHB2Q99623 299 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms