RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 BRS3P32247 399 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 RPL30P62888 115 aaKnown RBP11.56□□□□□ -0.56
UPF1-211ENST00000600868 CATR1Q13166 79 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 MOB3BQ86TA1 216 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 CENPSQ8N2Z9 138 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 DRAXINQ8NBI3 349 aaPredicted RBP11.56□□□□□ -0.56
UPF1-211ENST00000600868 OR5AN1Q8NGI8 311 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 C22orf15Q8WYQ4 148 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 DDB2Q92466 427 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 CFHR4Q92496 578 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 C20orf85Q9H1P6 137 aa11.56□□□□□ -0.56
UPF1-211ENST00000600868 MXRA5Q9NR99 2828 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 FAM90A9PA6NNJ1 464 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 H0YJW9 148 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 ARPC1BO15143 372 aaKnown RBP11.55□□□□□ -0.56
UPF1-211ENST00000600868 RLN1P04808 185 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 RRASP10301 218 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 CD1BP29016 333 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 MC5RP33032 325 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 LINC00205P59089 165 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 RGS21Q2M5E4 152 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 PLET1Q6UQ28 207 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 GLDNQ6ZMI3 551 aaPredicted RBP11.55□□□□□ -0.56
UPF1-211ENST00000600868 KCTD9Q7L273 389 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 TBC1D26Q86UD7 250 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 SLC25A42Q86VD7 318 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 ADAD2Q8NCV1 583 aaKnown RBP11.55□□□□□ -0.56
UPF1-211ENST00000600868 TCTEX1D2Q8WW35 142 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 TMEM230Q96A57 120 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 ZNF48Q96MX3 618 aaPredicted RBP11.55□□□□□ -0.56
UPF1-211ENST00000600868 GPHA2Q96T91 129 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 ALX4Q9H161 411 aaPredicted RBP11.55□□□□□ -0.56
UPF1-211ENST00000600868 NUDT15Q9NV35 164 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 FLVCR2Q9UPI3 526 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 PRELID3BQ9Y3B1 194 aa11.55□□□□□ -0.56
UPF1-211ENST00000600868 TRAV6A0A075B6T7 132 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 MDFIC2A0A1B0GVS7 189 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 CRYM-AS1A6NIL9 109 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 B3GALNT1O75752 331 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 APOA2P02652 100 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 H2AFB2P0C5Z0 115 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 F2RP25116 425 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 KIR2DS2P43631 304 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 RAB13P51153 203 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 MECP2P51608 486 aaKnown RBP11.54□□□□□ -0.56
UPF1-211ENST00000600868 TAS2R31P59538 309 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 UBE2MP61081 183 aaKnown RBP11.54□□□□□ -0.56
UPF1-211ENST00000600868 DHODHQ02127 395 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 LRRC75BQ2VPJ9 315 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 TMEM128Q5BJH2 165 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 Q6YL49 198 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 TMED4Q7Z7H5 227 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 THNSL2Q86YJ6 484 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 SGPP2Q8IWX5 399 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 OR51H1Q8NH63 302 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 NAA60Q9H7X0 242 aa11.54□□□□□ -0.56
UPF1-211ENST00000600868 FAM212BQ9NTI7 297 aaPredicted RBP11.54□□□□□ -0.56
UPF1-211ENST00000600868 LIN7CQ9NUP9 197 aaKnown RBP11.54□□□□□ -0.56
UPF1-211ENST00000600868 IGHV3-72A0A0B4J1Y9 119 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 H0Y980 276 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 RBFOX2O43251 390 aaKnown RBP eCLIP11.53□□□□□ -0.56
UPF1-211ENST00000600868 CRLF1O75462 422 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 VENTXO95231 258 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 SPNP16150 400 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 AKR1C4P17516 323 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 RAG2P55895 527 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 BRWD1-AS2P59051 145 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 EBI3Q14213 229 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 RTL8BQ17RB0 113 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 C11orf88Q6PI97 169 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 PDPNQ86YL7 162 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 PIFOQ8TCI5 191 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 CD300LFQ8TDQ1 290 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 ZDHHC16Q969W1 377 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 GALNT14Q96FL9 552 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 SSX3Q99909 188 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 MARVELD1Q9BSK0 173 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 SLC35D1Q9NTN3 355 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 WASHC3Q9Y3C0 194 aa11.53□□□□□ -0.56
UPF1-211ENST00000600868 NSD1Q96L73 2696 aaPredicted RBP11.53□□□□□ -0.56
UPF1-211ENST00000600868 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.57
UPF1-211ENST00000600868 TEX13DA0A0J9YY54 714 aaPredicted RBP11.52□□□□□ -0.57
UPF1-211ENST00000600868 C3orf85A0A1B0GTC6 90 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 H7C2Y5 167 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 FCGR3BO75015 233 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 PEX14O75381 377 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 FAM157CP0CG43 387 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 FAM106CPP0CH98 169 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 ANXA7P20073 488 aaKnown RBP11.52□□□□□ -0.57
UPF1-211ENST00000600868 IER3P46695 156 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 SUPT4H1P63272 117 aaKnown RBP11.52□□□□□ -0.57
UPF1-211ENST00000600868 OXA1LQ15070 435 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 DHRS7BQ6IAN0 325 aaPredicted RBP11.52□□□□□ -0.57
UPF1-211ENST00000600868 CCBE1Q6UXH8 406 aaPredicted RBP11.52□□□□□ -0.57
UPF1-211ENST00000600868 SPAG16Q8N0X2 631 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 SIGLECL1Q8N7X8 197 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 OR4S2Q8NH73 311 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 CAPSLQ8WWF8 208 aa11.52□□□□□ -0.57
UPF1-211ENST00000600868 KCNIP3Q9Y2W7 256 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms