RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 MMP23AO75900 390 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 CST7O76096 145 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 PPIAL4FP0DN26 164 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 CLINT1Q14677 625 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 RPL39P5Q59GN2 51 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 C1orf229Q6ZS94 237 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 MS4A5Q9H3V2 200 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 GFOD1Q9NXC2 390 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 TAS2R3Q9NYW6 316 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 PPIAL4AQ9Y536 164 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 BORCS7-ASMTA0A0B4J1R7 106 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 NKX6-3A6NJ46 265 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 B9A039 149 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 H3BP45 60 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 NDUFB7P17568 137 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 DUTP33316 252 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 EIF5AL1Q6IS14 154 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 C1orf87Q8N0U7 546 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 SLC25A31Q9H0C2 315 aa14.06□□□□□ -0.16
SHKBP1-216ENST00000598201 TNFRSF13BO14836 293 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 LOXP28300 417 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 CT45A1Q5HYN5 189 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 LYPD2Q6UXB3 125 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 TMEM217Q8N7C4 229 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 CT45A3Q8NHU0 189 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 GINS3Q9BRX5 216 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 SH3BGRL3Q9H299 93 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 SLC25A10Q9UBX3 287 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 TENM4Q6N022 2769 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 M0R1X1 148 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 SYNGR2O43760 224 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 IAPPP10997 89 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 SULT1A2P50226 295 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 ERVFRD-1P60508 538 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 HSD17B11Q8NBQ5 300 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 OR5C1Q8NGR4 320 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 CORO2AQ92828 525 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 LRRC46Q96FV0 321 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 SMIM8Q96KF7 97 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 RAB40CQ96S21 281 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 C19orf12Q9NSK7 152 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 FAM212BQ9NTI7 297 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 SESN1Q9Y6P5 492 aa14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 SPTBN1Q01082 2364 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-216ENST00000598201 NFYBP25208 207 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 DYNLT3P51808 116 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 TFF3Q07654 80 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 MIDNQ504T8 468 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 TCTEX1D1Q8N7M0 179 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 ABHD14AQ9BUJ0 271 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 LINC00574Q9H8X3 128 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 COA4Q9NYJ1 87 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 IDI2-AS1Q9NZ38 188 aa14.04□□□□□ -0.16
SHKBP1-216ENST00000598201 ZNF729A6NN14 1252 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 TOR1AO14656 332 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 TXNL1O43396 289 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 MED6O75586 246 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 SPP1P10451 314 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 FOSL1P15407 271 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 ZP3P21754 424 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 ZNF273Q14593 569 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 ZNF672Q499Z4 452 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 PRAMEF5Q5TYX0 476 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 MUC15Q8N387 334 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 FAM216AQ8WUB2 273 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 MARC2Q969Z3 335 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 NARFLQ9H6Q4 476 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 RFNGQ9Y644 331 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 ABCA4P78363 2273 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 DOPEY1Q5JWR5 2465 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 ITGB1BP1O14713 200 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 RPL23AP62750 156 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 TMEM267Q0VDI3 215 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 PXDC1Q5TGL8 231 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 STPG2Q8N412 459 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 ZNF439Q8NDP4 499 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 SAT2Q96F10 170 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 RAB9BQ9NP90 201 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 CTSZQ9UBR2 303 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 WSB1Q9Y6I7 421 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 COL12A1Q99715 3063 aa14.03□□□□□ -0.16
SHKBP1-216ENST00000598201 IGHV1-69-2A0A0G2JMI3 117 aa14.02□□□□□ -0.16
SHKBP1-216ENST00000598201 hADV38S2A0JD32 116 aa14.02□□□□□ -0.16
SHKBP1-216ENST00000598201 FCGR3BO75015 233 aa14.02□□□□□ -0.16
SHKBP1-216ENST00000598201 SEC11BP0C7V7 166 aa14.02□□□□□ -0.16
SHKBP1-216ENST00000598201 BAXQ07812 192 aa14.02□□□□□ -0.16
SHKBP1-216ENST00000598201 TUSC1Q2TAM9 212 aa14.02□□□□□ -0.16
SHKBP1-216ENST00000598201 HRH4Q9H3N8 390 aa14.02□□□□□ -0.16
SHKBP1-216ENST00000598201 LINC00312Q9Y6C7 94 aa14.02□□□□□ -0.16
SHKBP1-216ENST00000598201 FASNP49327 2511 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 GCN1Q92616 2671 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 SCO1O75880 301 aa14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 GNG10P50151 68 aa14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 RPL31P62899 125 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 TNFRSF9Q07011 255 aa14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 LINC00469Q8N7U9 141 aa14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 TMEM204Q9BSN7 226 aa14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 PSENENQ9NZ42 101 aa14.02□□□□□ -0.17
SHKBP1-216ENST00000598201 YLPM1P49750 1951 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-216ENST00000598201 SAA2-SAA4A0A096LPE2 208 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms