RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 SECTM1Q8WVN6 248 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 ADTRPQ96IZ2 230 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 RITA1Q96K30 269 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 SOSTQ9BQB4 213 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 ZNF747Q9BV97 191 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 CTDSPLO15194 276 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 FXYD4P59646 89 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 TAGLNQ01995 201 aaKnown RBP11.41□□□□□ -0.58
LIG1-208ENST00000595758 MMDQ15546 238 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 ACTBL2Q562R1 376 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 ZNF660Q6AZW8 331 aaPredicted RBP11.41□□□□□ -0.58
LIG1-208ENST00000595758 Q8N9W7 124 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 OR6F1Q8NGZ6 308 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 SMIM4Q8WVI0 70 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 WFDC12Q8WWY7 111 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 RASL11BQ9BPW5 248 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 ZNF2Q9BSG1 426 aaPredicted RBP11.41□□□□□ -0.58
LIG1-208ENST00000595758 SLC5A7Q9GZV3 580 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 SLC35D1Q9NTN3 355 aa11.41□□□□□ -0.58
LIG1-208ENST00000595758 RBMX2Q9Y388 322 aaKnown RBP11.41□□□□□ -0.58
LIG1-208ENST00000595758 M0QYG6 137 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 PEX14O75381 377 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 IGLV2-14P01704 120 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 DUTP33316 252 aaKnown RBP11.4□□□□□ -0.58
LIG1-208ENST00000595758 VDAC2P45880 294 aaPredicted RBP11.4□□□□□ -0.58
LIG1-208ENST00000595758 TSPAN5P62079 268 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 SSBP1Q04837 148 aaKnown RBP11.4□□□□□ -0.58
LIG1-208ENST00000595758 MSMO1Q15800 293 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 RTL8BQ17RB0 113 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 VAX1Q5SQQ9 334 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 PDPNQ86YL7 162 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.58
LIG1-208ENST00000595758 RNF5Q99942 180 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 CCL28Q9NRJ3 127 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 SERTAD4Q9NUC0 356 aa11.4□□□□□ -0.58
LIG1-208ENST00000595758 LIN7CQ9NUP9 197 aaKnown RBP11.4□□□□□ -0.58
LIG1-208ENST00000595758 A6NHS1 94 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 LINC00473A8K010 186 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 NBR2O15453 112 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 GSTZ1O43708 216 aaPredicted RBP11.39□□□□□ -0.59
LIG1-208ENST00000595758 CD3DP04234 171 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 IFNA6P05013 189 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 VSIG10L2P0DP72 767 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 RRASP10301 218 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 TBPP20226 339 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 CNTFRP26992 372 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 TAS2R19P59542 299 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
LIG1-208ENST00000595758 CBX3Q13185 183 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 TMEM95Q3KNT9 176 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 RNASE10Q5GAN6 216 aaKnown RBP11.39□□□□□ -0.59
LIG1-208ENST00000595758 SHISA2Q6UWI4 295 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 TMEM17Q86X19 198 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 FAM71E2Q8N5Q1 922 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 KLHDC1Q8N7A1 406 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 TMEM229BQ8NBD8 167 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 ZBTB34Q8NCN2 500 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 BVESQ8NE79 360 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 NPBQ8NG41 125 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 OR6Q1Q8NGQ2 317 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 MOB3AQ96BX8 217 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 HSD17B10Q99714 261 aaKnown RBP11.39□□□□□ -0.59
LIG1-208ENST00000595758 KIAA1456Q9P272 454 aa11.39□□□□□ -0.59
LIG1-208ENST00000595758 ZNF107Q9UII5 783 aaPredicted RBP11.39□□□□□ -0.59
LIG1-208ENST00000595758 EIF4EBP1Q13541 118 aaPredicted RBP11.38□□□□□ -0.59
LIG1-208ENST00000595758 C5orf64Q2M2E5 130 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 PYDC2Q56P42 97 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 SPANXN2Q5MJ10 180 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 ZNF66Q6ZN08 573 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 KCTD9Q7L273 389 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 CCDC190Q86UF4 302 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 DDB2Q92466 427 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 BORCS5Q969J3 196 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 TSNAXQ99598 290 aaKnown RBP11.38□□□□□ -0.59
LIG1-208ENST00000595758 TINAGL1Q9GZM7 467 aaPredicted RBP11.38□□□□□ -0.59
LIG1-208ENST00000595758 TAS2R8Q9NYW2 309 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 PRELID3BQ9Y3B1 194 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 DNHD1Q96M86 4753 aa11.38□□□□□ -0.59
LIG1-208ENST00000595758 RRHO14718 337 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 TNFSF12O43508 249 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 NDUFA3O95167 84 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 RAB3DO95716 219 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 IGHG2P01859 326 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 CD74P04233 296 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 CSF1P09603 554 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 PTBP1P26599 531 aaKnown RBP eCLIP11.37□□□□□ -0.59
LIG1-208ENST00000595758 GNRHRP30968 328 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 LGALS7P47929 136 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 KRTAP10-3P60369 221 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 RPL30P62888 115 aaKnown RBP11.37□□□□□ -0.59
LIG1-208ENST00000595758 SRSF4Q08170 494 aaKnown RBP11.37□□□□□ -0.59
LIG1-208ENST00000595758 PSG5Q15238 335 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 STEAP1BQ6NZ63 245 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 SLC35E3Q7Z769 313 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 MFSD4AQ8N468 514 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 TCTEX1D2Q8WW35 142 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 GPHA2Q96T91 129 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 WNT10AQ9GZT5 417 aa11.37□□□□□ -0.59
LIG1-208ENST00000595758 FBXL15Q9H469 300 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms