RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	RABL2A	Q9UBK7	228 aa	Predicted RBP	18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	RABL2B	Q9UNT1	228 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	ANK2	Q01484	3957 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081		A6NHS1	94 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	CTDSPL	O15194	276 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	FGF16	O43320	207 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	MC5R	P33032	325 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	PROK1	P58294	105 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	HERV-K104	P61576	105 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	MMD	Q15546	238 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	ARSJ	Q5FYB0	599 aa	Predicted RBP	18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	DHRS11	Q6UWP2	260 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	TMEM17	Q86X19	198 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081		Q8N9W7	124 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	SLC5A7	Q9GZV3	580 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	CCL28	Q9NRJ3	127 aa		18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	RBMX2	Q9Y388	322 aa	Known RBP	18.19	■□□□□ 0.5
PNKP-205	ENST00000595081	APOA2	P02652	100 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	CD3D	P04234	171 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	IGKV1-16	P04430	117 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	DUT	P33316	252 aa	Known RBP	18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	THBS3	P49746	956 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	OR8H1	Q8NGG4	311 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	WFDC12	Q8WWY7	111 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	SLC35D1	Q9NTN3	355 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	SERTAD4	Q9NUC0	356 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081		V9GYH0	126 aa		18.18	■□□□□ 0.5
PNKP-205	ENST00000595081	LINC00473	A8K010	186 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	PEX14	O75381	377 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	SLC22A5	O76082	557 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	ACTBL2	Q562R1	376 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	CCDC190	Q86UF4	302 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	OR6Q1	Q8NGQ2	317 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	OR6F1	Q8NGZ6	308 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	MOB3A	Q96BX8	217 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	GPHA2	Q96T91	129 aa		18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	TINAGL1	Q9GZM7	467 aa	Predicted RBP	18.17	■□□□□ 0.5
PNKP-205	ENST00000595081	VDAC2	P45880	294 aa	Predicted RBP	18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	KRTAP10-3	P60369	221 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	TSPAN5	P62079	268 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	SRSF4	Q08170	494 aa	Known RBP	18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	RNASE10	Q5GAN6	216 aa	Known RBP	18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	VAX1	Q5SQQ9	334 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	PDPN	Q86YL7	162 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	FAM71E2	Q8N5Q1	922 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	TMEM229B	Q8NBD8	167 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	BVES	Q8NE79	360 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	DDB2	Q92466	427 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	ADTRP	Q96IZ2	230 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	ZNF747	Q9BV97	191 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	FXYD6	Q9H0Q3	95 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	TAS2R8	Q9NYW2	309 aa		18.16	■□□□□ 0.5
PNKP-205	ENST00000595081	NBR2	O15453	112 aa		18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	TNFSF12	O43508	249 aa		18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	GSTZ1	O43708	216 aa	Predicted RBP	18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	RPL30	P62888	115 aa	Known RBP	18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	SSBP1	Q04837	148 aa	Known RBP	18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	EIF4EBP1	Q13541	118 aa	Predicted RBP	18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	KCTD9	Q7L273	389 aa		18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	OR4D10	Q8NGI6	311 aa		18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	RASL11B	Q9BPW5	248 aa		18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	LIN7C	Q9NUP9	197 aa	Known RBP	18.15	■□□□□ 0.5
PNKP-205	ENST00000595081	VSIG10L2	P0DP72	767 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	TBP	P20226	339 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	TAS2R19	P59542	299 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	ZNF79	Q15937	498 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	PYDC2	Q56P42	97 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	OR2B11	Q5JQS5	317 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	ZNF818P	Q6ZRF7	136 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	KLHDC1	Q8N7A1	406 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	NPB	Q8NG41	125 aa		18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	FLYWCH2	Q96CP2	140 aa	Known RBP	18.14	■□□□□ 0.49
PNKP-205	ENST00000595081	CD74	P04233	296 aa		18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	IFNA6	P05013	189 aa		18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	GNRHR	P30968	328 aa		18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	RPS16	P62249	146 aa	Known RBP	18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	MSMO1	Q15800	293 aa		18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	RTL8B	Q17RB0	113 aa		18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	STEAP1B	Q6NZ63	245 aa		18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	TCTEX1D2	Q8WW35	142 aa		18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	HSD17B10	Q99714	261 aa	Known RBP	18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	KIAA1456	Q9P272	454 aa		18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	ZNF107	Q9UII5	783 aa	Predicted RBP	18.13	■□□□□ 0.49
PNKP-205	ENST00000595081	LINC01548	A6NM66	108 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	NDUFA3	O95167	84 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	RAB3D	O95716	219 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	CSF1	P09603	554 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	TAGLN	Q01995	201 aa	Known RBP	18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	C5orf64	Q2M2E5	130 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	CNPY1	Q3B7I2	92 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	SPANXN2	Q5MJ10	180 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	FAAP20	Q6NZ36	180 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	MFSD4A	Q8N468	514 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	HSPB9	Q9BQS6	159 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	FBXL15	Q9H469	300 aa		18.12	■□□□□ 0.49
PNKP-205	ENST00000595081	RRH	O14718	337 aa		18.11	■□□□□ 0.49
PNKP-205	ENST00000595081	FCGR3B	O75015	233 aa		18.11	■□□□□ 0.49
PNKP-205	ENST00000595081	CRYZL1	O95825	349 aa		18.11	■□□□□ 0.49
PNKP-205	ENST00000595081	RRAS	P10301	218 aa		18.11	■□□□□ 0.49
PNKP-205	ENST00000595081	ETV6	P41212	452 aa		18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms