RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CMSS1Q9BQ75 279 aaKnown RBP17.36■□□□□ 0.37
SSBP4-203ENST00000593641 SLC35D1Q9NTN3 355 aa17.36■□□□□ 0.37
SSBP4-203ENST00000593641 A8MZ25 164 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 M0R1X1 148 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 CD37P11049 281 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 SNRPBP14678 240 aaKnown RBP17.35■□□□□ 0.37
SSBP4-203ENST00000593641 LINC00205P59089 165 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 ZFAND6Q6FIF0 208 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 FAM89BQ8N5H3 189 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.35■□□□□ 0.37
SSBP4-203ENST00000593641 ARHGAP5-AS1Q96IT6 56 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 RDH8Q9NYR8 311 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 CSMD3Q7Z407 3707 aa17.35■□□□□ 0.37
SSBP4-203ENST00000593641 LCE6AA0A183 80 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 ANKRD34BA5PLL1 514 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 PTGES3LE9PB15 166 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 SLC17A2O00624 439 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 VEGFCP49767 419 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 OR9G4Q8NGQ1 327 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 TMEM68Q96MH6 324 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 VCXQ9H320 206 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 C19orf73Q9NVV2 129 aa17.34■□□□□ 0.37
SSBP4-203ENST00000593641 LSM2Q9Y333 95 aaKnown RBP17.34■□□□□ 0.37
SSBP4-203ENST00000593641 FOXI3A8MTJ6 420 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-203ENST00000593641 TRDCB7Z8K6 153 aa17.33■□□□□ 0.36
SSBP4-203ENST00000593641 H0Y980 276 aa17.33■□□□□ 0.36
SSBP4-203ENST00000593641 SERPINB10P48595 397 aa17.33■□□□□ 0.36
SSBP4-203ENST00000593641 MRPS15P82914 257 aaKnown RBP17.33■□□□□ 0.36
SSBP4-203ENST00000593641 CBX3Q13185 183 aa17.33■□□□□ 0.36
SSBP4-203ENST00000593641 RAB11BQ15907 218 aa17.33■□□□□ 0.36
SSBP4-203ENST00000593641 OGFRL1Q5TC84 451 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-203ENST00000593641 LIPKQ5VXJ0 399 aa17.33■□□□□ 0.36
SSBP4-203ENST00000593641 TMEM203Q969S6 136 aa17.33■□□□□ 0.36
SSBP4-203ENST00000593641 IGKV1-6A0A0C4DH72 117 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 AADACP22760 399 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 LGALS7P47929 136 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 TMEM50BP56557 158 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 OR56B1Q8NGI3 324 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 HARBI1Q96MB7 349 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 SPATA25Q9BR10 227 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 PECRQ9BY49 303 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 SCN3BQ9NY72 215 aa17.32■□□□□ 0.36
SSBP4-203ENST00000593641 AK6Q9Y3D8 172 aaKnown RBP17.32■□□□□ 0.36
SSBP4-203ENST00000593641 DNAH1Q9P2D7 4330 aa17.31■□□□□ 0.36
SSBP4-203ENST00000593641 ARL6IP5O75915 188 aa17.31■□□□□ 0.36
SSBP4-203ENST00000593641 RANBP1P43487 201 aa17.31■□□□□ 0.36
SSBP4-203ENST00000593641 SYNJ2BPP57105 145 aa17.31■□□□□ 0.36
SSBP4-203ENST00000593641 KLF5Q13887 457 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-203ENST00000593641 OR4A4PQ8NGN8 299 aa17.31■□□□□ 0.36
SSBP4-203ENST00000593641 GFI1Q99684 422 aa17.31■□□□□ 0.36
SSBP4-203ENST00000593641 OR2D2Q9H210 308 aa17.31■□□□□ 0.36
SSBP4-203ENST00000593641 EDA2RQ9HAV5 297 aa17.31■□□□□ 0.36
SSBP4-203ENST00000593641 GAR1Q9NY12 217 aaKnown RBP17.31■□□□□ 0.36
SSBP4-203ENST00000593641 IGLV2-23P01705 113 aa17.3■□□□□ 0.36
SSBP4-203ENST00000593641 SSBP2P81877 361 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-203ENST00000593641 PJVKQ0ZLH3 352 aa17.3■□□□□ 0.36
SSBP4-203ENST00000593641 TRAM1Q15629 374 aa17.3■□□□□ 0.36
SSBP4-203ENST00000593641 TATDN3Q17R31 274 aa17.3■□□□□ 0.36
SSBP4-203ENST00000593641 GTSCR1Q86UQ5 136 aa17.3■□□□□ 0.36
SSBP4-203ENST00000593641 PHB2Q99623 299 aa17.3■□□□□ 0.36
SSBP4-203ENST00000593641 TINAGL1Q9GZM7 467 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-203ENST00000593641 COA4Q9NYJ1 87 aa17.3■□□□□ 0.36
SSBP4-203ENST00000593641 PEF1Q9UBV8 284 aaKnown RBP17.3■□□□□ 0.36
SSBP4-203ENST00000593641 EPPK1P58107 5090 aaKnown RBP17.29■□□□□ 0.36
SSBP4-203ENST00000593641 CASQ2O14958 399 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-203ENST00000593641 BET1O15155 118 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 SHOXO15266 292 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 FABP7O15540 132 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 CD3GP09693 182 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 HSMCR30P0CW71 290 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 CLDN12P56749 244 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 TAGLNQ01995 201 aaKnown RBP17.29■□□□□ 0.36
SSBP4-203ENST00000593641 RTL8BQ17RB0 113 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 RPEL1Q2QD12 228 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 OR10J5Q8NHC4 309 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 TUBA4BQ9H853 241 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 SDHAF2Q9NX18 166 aa17.29■□□□□ 0.36
SSBP4-203ENST00000593641 DENRO43583 198 aaKnown RBP17.28■□□□□ 0.36
SSBP4-203ENST00000593641 BRI3O95415 125 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 CRYGBP07316 175 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 PSMA1P25786 263 aaKnown RBP17.28■□□□□ 0.36
SSBP4-203ENST00000593641 RPS25P62851 125 aaKnown RBP17.28■□□□□ 0.36
SSBP4-203ENST00000593641 DEFA5Q01523 94 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 PLAC9Q5JTB6 97 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 LCN12Q6JVE5 192 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 TMEM91Q6ZNR0 172 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 BVESQ8NE79 360 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 FAM3DQ96BQ1 224 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 USMG5Q96IX5 58 aa17.28■□□□□ 0.36
SSBP4-203ENST00000593641 IFNA6P05013 189 aa17.27■□□□□ 0.36
SSBP4-203ENST00000593641 CALRP27797 417 aaKnown RBP17.27■□□□□ 0.36
SSBP4-203ENST00000593641 IRF3Q14653 427 aa17.27■□□□□ 0.36
SSBP4-203ENST00000593641 ZNF343Q6P1L6 599 aa17.27■□□□□ 0.36
SSBP4-203ENST00000593641 IL34Q6ZMJ4 242 aa17.27■□□□□ 0.36
SSBP4-203ENST00000593641 Q8N402 240 aa17.27■□□□□ 0.36
SSBP4-203ENST00000593641 RBM7Q9Y580 266 aaKnown RBP17.27■□□□□ 0.36
SSBP4-203ENST00000593641 RRASP10301 218 aa17.26■□□□□ 0.35
SSBP4-203ENST00000593641 DYRK1AQ13627 763 aa17.26■□□□□ 0.35
SSBP4-203ENST00000593641 TPBGQ13641 420 aa17.26■□□□□ 0.35
SSBP4-203ENST00000593641 HAGHQ16775 308 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms