RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 LHFPL6Q9Y693 200 aa10.43□□□□□ -0.74
SMARCA4-217ENST00000591595 FAM24AA6NFZ4 105 aa10.43□□□□□ -0.74
SMARCA4-217ENST00000591595 LIPT2A6NK58 231 aa10.43□□□□□ -0.74
SMARCA4-217ENST00000591595 TM2D1Q9BX74 207 aa10.43□□□□□ -0.74
SMARCA4-217ENST00000591595 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
SMARCA4-217ENST00000591595 MOB1AQ9H8S9 216 aa10.43□□□□□ -0.74
SMARCA4-217ENST00000591595 PHF3Q92576 2039 aaKnown RBP10.43□□□□□ -0.74
SMARCA4-217ENST00000591595 B9A039 149 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 DUX1O43812 170 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 PMCHP20382 165 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 GATA3P23771 443 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 ZNF133P52736 654 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 ARF1P84077 181 aaKnown RBP10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 PMCHL1Q16048 86 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 CD300EQ496F6 205 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 C12orf54Q6X4T0 127 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 OR5AS1Q8N127 324 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 OR2C3Q8N628 320 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 SLC25A40Q8TBP6 338 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 NEUROG1Q92886 237 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 SLC7A10Q9NS82 523 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 TSSC4Q9Y5U2 329 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 TRAV9-2A0A087WT02 112 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 SHISA7A6NL88 538 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 WNT2P09544 360 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 ID1P41134 155 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 NKX2-1P43699 371 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 TAS2R46P59540 309 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 YPEL3P61236 119 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 PLEKHF2Q9H8W4 249 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 THADAQ6YHU6 1953 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 CELA3BP08861 270 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 IGLL1P15814 213 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 INO80CQ6PI98 192 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 FAM58AQ8N1B3 248 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 LINC00470Q9BZP3 86 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 TP73-AS1Q9UF72 201 aa10.42□□□□□ -0.74
SMARCA4-217ENST00000591595 LMO7DNF2Z398 122 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 C17orf112F2Z3M2 114 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 LAMTOR5O43504 91 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 IFNA1P01562 189 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 GYPAP02724 150 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 GLI4P10075 376 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 KISS1Q15726 138 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 SULF2Q8IWU5 870 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 OR5C1Q8NGR4 320 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 PIGTQ969N2 578 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 ABCA7Q8IZY2 2146 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 IGHV1OR21-1A0A087WYE8 117 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 FAM231BA6NCW3 169 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 FCGR2AP12318 317 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 NPFFR1Q9GZQ6 430 aa10.41□□□□□ -0.74
SMARCA4-217ENST00000591595 TMEM164Q5U3C3 297 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 DOK3Q7L591 496 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 C1QL2Q7Z5L3 287 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 ZNF441Q8N8Z8 693 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 REPIN1Q9BWE0 567 aaKnown RBP10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 SPTBN5Q9NRC6 3674 aaKnown RBP10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 JPT1Q9UK76 154 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 IGSF23A1L1A6 192 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 C7orf71A4D174 169 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 SIRPB1O00241 398 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 S1PR2O95136 353 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 CBLN1P23435 193 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 CD27P26842 260 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 PIGPP57054 158 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 Q0VG73 95 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 LCN12Q6JVE5 192 aa10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 RTN4IP1Q8WWV3 396 aaPredicted RBP10.4□□□□□ -0.74
SMARCA4-217ENST00000591595 TEX48A0A1B0GUV7 120 aa10.4□□□□□ -0.75
SMARCA4-217ENST00000591595 MPPED1O15442 326 aa10.4□□□□□ -0.75
SMARCA4-217ENST00000591595 ZNF207O43670 478 aaKnown RBP10.4□□□□□ -0.75
SMARCA4-217ENST00000591595 TLE1Q04724 770 aa10.4□□□□□ -0.75
SMARCA4-217ENST00000591595 RNFT1Q5M7Z0 435 aa10.4□□□□□ -0.75
SMARCA4-217ENST00000591595 ST6GALNAC6Q969X2 333 aa10.4□□□□□ -0.75
SMARCA4-217ENST00000591595 DOCK11Q5JSL3 2073 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 IGHV1OR15-9A0A0B4J2B8 117 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 C6orf201Q7Z4U5 140 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 PLPPR1Q8TBJ4 325 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 AP1S3Q96PC3 154 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 RALGAPA1Q6GYQ0 2036 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 EFNA2O43921 213 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 CLDN1O95832 211 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 NRASP01111 189 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 KRASP01116 189 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 CLDN17P56750 224 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 FXYD4P59646 89 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 SSBP2P81877 361 aaPredicted RBP10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 MEF2BQ02080 365 aaPredicted RBP10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 GABRA6Q16445 453 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 RSPO4Q2I0M5 234 aaPredicted RBP10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 SMIM20Q8N5G0 67 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 C1orf147Q96MC9 270 aaPredicted RBP10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 MRPL18Q9H0U6 180 aaKnown RBP10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 FBLN5Q9UBX5 448 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 IGKV1-9A0A0C4DH69 117 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 ZNF850A8MQ14 1090 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 C2CD4DB7Z1M9 353 aa10.39□□□□□ -0.75
SMARCA4-217ENST00000591595 PPOXP50336 477 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms