RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 TAS2R46P59540 309 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 CBX3Q13185 183 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 CDK10Q15131 360 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 RTL8BQ17RB0 113 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 SNX29P2Q8IUI4 249 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 GPX8Q8TED1 209 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 C15orf40Q8WUR7 153 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 FLYWCH2Q96CP2 140 aaKnown RBP9.4□□□□□ -0.9
LIG3-213ENST00000590630 C5orf30Q96GV9 206 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 TSNAXQ99598 290 aaKnown RBP9.4□□□□□ -0.9
LIG3-213ENST00000590630 SLC35D1Q9NTN3 355 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 ZNF107Q9UII5 783 aaPredicted RBP9.4□□□□□ -0.9
LIG3-213ENST00000590630 ZNF580Q9UK33 172 aa9.4□□□□□ -0.9
LIG3-213ENST00000590630 IGKV1D-13A0A0B4J2D9 117 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 RRHO14718 337 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 SPDEFO95238 335 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 PPYP01298 95 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 OPN1MWP04001 364 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 FCER2P06734 321 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 CSF1P09603 554 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 OPN1MW2P0DN77 364 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 OPN1MW3P0DN78 364 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 IGKV1-13P0DP09 117 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 DUTP33316 252 aaKnown RBP9.39□□□□□ -0.91
LIG3-213ENST00000590630 LINC00205P59089 165 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 SLC35B1P78383 322 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 CD83Q01151 205 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 MSMO1Q15800 293 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 LIN54Q6MZP7 749 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 TREML4Q6UXN2 200 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 OVCH2Q7RTZ1 564 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 NDUFA11Q86Y39 141 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 STPG2Q8N412 459 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 GIMAP1Q8WWP7 306 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 DDB2Q92466 427 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 NOL4LQ96MY1 436 aaPredicted RBP9.39□□□□□ -0.91
LIG3-213ENST00000590630 CITED2Q99967 270 aaPredicted RBP9.39□□□□□ -0.91
LIG3-213ENST00000590630 HSPB9Q9BQS6 159 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 EHFQ9NZC4 300 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 EXTL2Q9UBQ6 330 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 RBMX2Q9Y388 322 aaKnown RBP9.39□□□□□ -0.91
LIG3-213ENST00000590630 CEPT1Q9Y6K0 416 aa9.39□□□□□ -0.91
LIG3-213ENST00000590630 TNCP24821 2201 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 LINC01548A6NM66 108 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 LINC00473A8K010 186 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 J3QRK9 145 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 IGLV2-14P01704 120 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 IGF1P05019 195 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 AADACP22760 399 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 RCVRNP35243 200 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 LGALS7P47929 136 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 RPS16P62249 146 aaKnown RBP9.38□□□□□ -0.91
LIG3-213ENST00000590630 DYRK1AQ13627 763 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 PLGLAQ15195 96 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 DHRS11Q6UWP2 260 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 LAX1Q8IWV1 398 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 OR5H2Q8NGV7 314 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 HSD17B10Q99714 261 aaKnown RBP9.38□□□□□ -0.91
LIG3-213ENST00000590630 MIXL1Q9H2W2 232 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 MMP27Q9H306 513 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 PRELID3BQ9Y3B1 194 aa9.38□□□□□ -0.91
LIG3-213ENST00000590630 NOTCH1P46531 2555 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 IGHV7-81A0A0B4J1V7 117 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 TCRBV4S1A1TA0A5B7 111 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 CCDC160A6NGH7 325 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 ZNF701M0R085 212 aaPredicted RBP9.37□□□□□ -0.91
LIG3-213ENST00000590630 CTDSP2O14595 271 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 TSPAN15O95858 294 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 VDAC1P21796 283 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 HRH1P35367 487 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 RFX2P48378 723 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 HERV-K104P61576 105 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 PSG5Q15238 335 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 TMEM177Q53S58 311 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 TCTEX1D4Q5JR98 221 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 C10orf99Q6UWK7 81 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 KCTD9Q7L273 389 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 ZNF329Q86UD4 541 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 LYSMD2Q8IV50 215 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 ZBTB34Q8NCN2 500 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 BVESQ8NE79 360 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 SECTM1Q8WVN6 248 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 BORCS5Q969J3 196 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 HARBI1Q96MB7 349 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 SLIRPQ9GZT3 109 aaKnown RBP9.37□□□□□ -0.91
LIG3-213ENST00000590630 RBM38Q9H0Z9 239 aaKnown RBP9.37□□□□□ -0.91
LIG3-213ENST00000590630 OR51J1Q9H342 316 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 FBXL15Q9H469 300 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 RABL2AQ9UBK7 228 aaPredicted RBP9.37□□□□□ -0.91
LIG3-213ENST00000590630 METTL1Q9UBP6 276 aaKnown RBP9.37□□□□□ -0.91
LIG3-213ENST00000590630 LINC00527Q9UJ94 153 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 RABL2BQ9UNT1 228 aa9.37□□□□□ -0.91
LIG3-213ENST00000590630 TSSC4Q9Y5U2 329 aaPredicted RBP9.37□□□□□ -0.91
LIG3-213ENST00000590630 CMYA5Q8N3K9 4069 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 ADARB2-AS1A8MUL3 147 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 SHOXO15266 292 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 SLC25A17O43808 307 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 CRYZL1O95825 349 aa9.36□□□□□ -0.91
LIG3-213ENST00000590630 PMP2P02689 132 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms