RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 CEACAM3P40198 252 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 RAG2P55895 527 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 LGALS4P56470 323 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 RPL39P5Q59GN2 51 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 CCBE1Q6UXH8 406 aaPredicted RBP13.39□□□□□ -0.27
GCDH-213ENST00000590627 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 AJUBAQ96IF1 538 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 MARVELD1Q9BSK0 173 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 ALX4Q9H161 411 aaPredicted RBP13.39□□□□□ -0.27
GCDH-213ENST00000590627 SLC2A9Q9NRM0 540 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 NUDT15Q9NV35 164 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 FLVCR2Q9UPI3 526 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 TRRAPQ9Y4A5 3859 aa13.39□□□□□ -0.27
GCDH-213ENST00000590627 ARPC1BO15143 372 aaKnown RBP13.38□□□□□ -0.27
GCDH-213ENST00000590627 PGLYRP1O75594 196 aaPredicted RBP13.38□□□□□ -0.27
GCDH-213ENST00000590627 H2AFB2P0C5Z0 115 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 PI3P19957 117 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 S100GP29377 79 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 SAA4P35542 130 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 PIGPP57054 158 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 UBE2MP61081 183 aaKnown RBP13.38□□□□□ -0.27
GCDH-213ENST00000590627 ZNF816Q0VGE8 651 aaPredicted RBP13.38□□□□□ -0.27
GCDH-213ENST00000590627 ABCA11PQ4W5N1 156 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 TPTE2P1Q5T6R2 138 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 ZNF66Q6ZN08 573 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 SLC25A42Q86VD7 318 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 CENPSQ8N2Z9 138 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 MALSU1Q96EH3 234 aa13.38□□□□□ -0.27
GCDH-213ENST00000590627 HSD17B10Q99714 261 aaKnown RBP13.38□□□□□ -0.27
GCDH-213ENST00000590627 A0A1W2PRD5 423 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 A0A1W2PRF3 423 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 A0A1W2PRM7 423 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 M0R1X1 148 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 MPPED1O15442 326 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 TXNL1O43396 289 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 GAPDHP04406 335 aaKnown RBP13.37□□□□□ -0.27
GCDH-213ENST00000590627 RLN1P04808 185 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 DUTP33316 252 aaKnown RBP13.37□□□□□ -0.27
GCDH-213ENST00000590627 TAS2R31P59538 309 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 DHODHQ02127 395 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 TRIM16LQ309B1 348 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 PHLDA2Q53GA4 152 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 C9orf139Q6ZV77 190 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 KCTD9Q7L273 389 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 LHFPL4Q7Z7J7 247 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 CCDC71LQ8N9Z2 235 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 RTN4IP1Q8WWV3 396 aaPredicted RBP13.37□□□□□ -0.27
GCDH-213ENST00000590627 TMEM230Q96A57 120 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 RPEQ96AT9 228 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 ADTRPQ96IZ2 230 aa13.37□□□□□ -0.27
GCDH-213ENST00000590627 TRAV6A0A075B6T7 132 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 DNAJC9-AS1A6NH13 148 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 PEX14O75381 377 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 CT45A6P0DMU7 189 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 CT45A5P0DMU8 189 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 CT45A7P0DMV0 189 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 DIAPH2-AS1Q14236 149 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 TMEM128Q5BJH2 165 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 TMED4Q7Z7H5 227 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 OR8H3Q8N146 312 aa13.36□□□□□ -0.27
GCDH-213ENST00000590627 ADAD2Q8NCV1 583 aaKnown RBP13.36□□□□□ -0.27
GCDH-213ENST00000590627 IGHV3OR16-10A0A075B7F0 116 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 CRYM-AS1A6NIL9 109 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 INMT-MINDY4F8WBC2 141 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 CLDN34H7C241 214 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 B3GALNT1O75752 331 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 RNASE1P07998 156 aaKnown RBP13.35□□□□□ -0.27
GCDH-213ENST00000590627 ANXA7P20073 488 aaKnown RBP13.35□□□□□ -0.27
GCDH-213ENST00000590627 F2RP25116 425 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 THBS3P49746 956 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 CCDC144NLQ6NUI1 221 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 BRD3OSQ6XYD6 125 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 TBC1D26Q86UD7 250 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 C17orf50Q8WW18 174 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 DDB2Q92466 427 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 NABP2Q9BQ15 211 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 MRPL20Q9BYC9 149 aaKnown RBP13.35□□□□□ -0.27
GCDH-213ENST00000590627 NAA60Q9H7X0 242 aa13.35□□□□□ -0.27
GCDH-213ENST00000590627 IGHV1-3A0A0C4DH29 117 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 A0A1W2PPI3 338 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 LINC00473A8K010 186 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 KCNAB3O43448 404 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 TNFSF12O43508 249 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 IL5P05113 134 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 VSIG10L2P0DP72 767 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 AKR1C4P17516 323 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 REG1BP48304 166 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 RPL30P62888 115 aaKnown RBP13.34□□□□□ -0.27
GCDH-213ENST00000590627 TAGLNQ01995 201 aaKnown RBP13.34□□□□□ -0.27
GCDH-213ENST00000590627 CATR1Q13166 79 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 HABP2Q14520 560 aaPredicted RBP13.34□□□□□ -0.27
GCDH-213ENST00000590627 SSX2Q16385 188 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 DYNAPQ8N1N2 210 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 TCTEX1D1Q8N7M0 179 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 ZNF383Q8NA42 475 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 DRAXINQ8NBI3 349 aaPredicted RBP13.34□□□□□ -0.27
GCDH-213ENST00000590627 OR5AN1Q8NGI8 311 aa13.34□□□□□ -0.27
GCDH-213ENST00000590627 GALNT14Q96FL9 552 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms