RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 EBI3Q14213 229 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 MZT2BQ6NZ67 158 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 C16orf87Q6PH81 154 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 DRAXINQ8NBI3 349 aaPredicted RBP9.78□□□□□ -0.84
DNMT1-218ENST00000589294 MARCH1Q8TCQ1 289 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 CAPSLQ8WWF8 208 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 MRGPRFQ96AM1 343 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 C5orf30Q96GV9 206 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 RNF5Q99942 180 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 PITPNC1Q9UKF7 332 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 GPR132Q9UNW8 380 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 PRELID3BQ9Y3B1 194 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 ZFHX3Q15911 3703 aa9.78□□□□□ -0.84
DNMT1-218ENST00000589294 H0YJW9 148 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 H3BUX3 64 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 HOXA3O43365 443 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-218ENST00000589294 TCF21O43680 179 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 VENTXO95231 258 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 MOSP00540 346 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 IGHV4-59P01825 116 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 APOA2P02652 100 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 CTSDP07339 412 aaPredicted RBP9.77□□□□□ -0.85
DNMT1-218ENST00000589294 DEFA1P59665 94 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 DEFA3P59666 94 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 HILS1P60008 231 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 RND3P61587 244 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 SLC9A3R2Q15599 337 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 ABCA11PQ4W5N1 156 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 LIAT1Q6ZQX7 453 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 TCTEX1D1Q8N7M0 179 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 ZDHHC22Q8N966 263 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 ZNF383Q8NA42 475 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 OR2T10Q8NGZ9 312 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 DDB2Q92466 427 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 PALMDQ9NP74 551 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 C14orf166Q9Y224 244 aaKnown RBP9.77□□□□□ -0.85
DNMT1-218ENST00000589294 WASHC3Q9Y3C0 194 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 JMJD1CQ15652 2540 aa9.77□□□□□ -0.85
DNMT1-218ENST00000589294 A6NDX4 124 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 LINC00473A8K010 186 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 MPPED1O15442 326 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 NDUFB6O95139 128 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 SNRNP70P08621 437 aaKnown RBP9.76□□□□□ -0.85
DNMT1-218ENST00000589294 SLC6A1P30531 599 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 KIR2DS2P43631 304 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 CATR1Q13166 79 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 CBX3Q13185 183 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 RBMS2Q15434 407 aaKnown RBP9.76□□□□□ -0.85
DNMT1-218ENST00000589294 RTL8BQ17RB0 113 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 GLDNQ6ZMI3 551 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-218ENST00000589294 KCTD9Q7L273 389 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 PDPNQ86YL7 162 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 LURAP1LQ8IV03 231 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 CCDC71LQ8N9Z2 235 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 OR8H1Q8NGG4 311 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 CD300LFQ8TDQ1 290 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 EAF1Q96JC9 268 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-218ENST00000589294 RTBDNQ9BSG5 229 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-218ENST00000589294 SLC2A9Q9NRM0 540 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 FAM212BQ9NTI7 297 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-218ENST00000589294 COPZ2Q9P299 210 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 TBC1D24Q9ULP9 559 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 TCF19Q9Y242 345 aa9.76□□□□□ -0.85
DNMT1-218ENST00000589294 IGHV3-72A0A0B4J1Y9 119 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 H7C2Y5 167 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.858e-9■■■■□ 24.9
DNMT1-218ENST00000589294 TNFSF12O43508 249 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 B3GALNT1O75752 331 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 IGKV1D-33P01593 117 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 IGKV1-33P01594 117 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 CD24P25063 80 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 F2RP25116 425 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 BTCP35070 178 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 LGALS7P47929 136 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 CCR6P51684 374 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 PIGPP57054 158 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 LINC00205P59089 165 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 RPL30P62888 115 aaKnown RBP9.75□□□□□ -0.85
DNMT1-218ENST00000589294 HES1Q14469 280 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 PHLDA2Q53GA4 152 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 DHRS7BQ6IAN0 325 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-218ENST00000589294 C16orf82Q7Z2V1 217 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 Q8N6K4 173 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 POC5Q8NA72 575 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 OR4C13Q8NGP0 309 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 TCTEX1D2Q8WW35 142 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 FLYWCH2Q96CP2 140 aaKnown RBP9.75□□□□□ -0.85
DNMT1-218ENST00000589294 C5orf66Q9H5L9 145 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 RAB18Q9NP72 206 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 SLC35D1Q9NTN3 355 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 VPREB3Q9UKI3 123 aa9.75□□□□□ -0.85
DNMT1-218ENST00000589294 FAM240BA0A1B0GVZ2 78 aa9.74□□□□□ -0.85
DNMT1-218ENST00000589294 DNAJC9-AS1A6NH13 148 aa9.74□□□□□ -0.85
DNMT1-218ENST00000589294 OR2F2O95006 317 aa9.74□□□□□ -0.85
DNMT1-218ENST00000589294 RNASE1P07998 156 aaKnown RBP9.74□□□□□ -0.85
DNMT1-218ENST00000589294 TMEM11P17152 192 aa9.74□□□□□ -0.85
DNMT1-218ENST00000589294 PI3P19957 117 aa9.74□□□□□ -0.85
DNMT1-218ENST00000589294 BRWD1-AS2P59051 145 aa9.74□□□□□ -0.85
DNMT1-218ENST00000589294 RPL15P61313 204 aaKnown RBP9.74□□□□□ -0.85
DNMT1-218ENST00000589294 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms