RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 AIFM2Q9BRQ8 373 aa8.6□□□□□ -1.03
CHMP1B-202ENST00000588284 LRRK2Q5S007 2527 aa8.6□□□□□ -1.03
CHMP1B-202ENST00000588284 ADGRG4Q8IZF6 3080 aa8.6□□□□□ -1.03
CHMP1B-202ENST00000588284 DSCAML1Q8TD84 2053 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 A0A1B0GU03 582 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 A0A1W2PPE3 182 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 C22orf46C9J442 243 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 PROP1O75360 226 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 MPC2O95563 127 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 HPRT1P00492 218 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 SLC25A16P16260 332 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 PRTN3P24158 256 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 COL8A1P27658 744 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 NUP62P37198 522 aaPredicted RBP8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 ARHGDIBP52566 201 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 ARF6P62330 175 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 RPL30P62888 115 aaKnown RBP8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 SMCO1Q147U7 214 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 NCR3LG1Q68D85 454 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 C11orf87Q6NUJ2 197 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 BTNL3Q6UXE8 466 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 LRRC75A-AS1Q8N1F1 130 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 BEND2Q8NDZ0 799 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 WDR89Q96FK6 387 aaPredicted RBP8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 ZNF251Q9BRH9 671 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 CLEC7AQ9BXN2 247 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 PLEKHA2Q9HB19 425 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 ONECUT1Q9UBC0 465 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 POLR3KQ9Y2Y1 108 aaPredicted RBP8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 AMMECR1Q9Y4X0 333 aaPredicted RBP8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 KPTNQ9Y664 436 aa8.59□□□□□ -1.03
CHMP1B-202ENST00000588284 SAA2-SAA4A0A096LPE2 208 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 LINC00473A8K010 186 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 ST8SIA3O43173 380 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 SAA2P0DJI9 122 aaPredicted RBP8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 MC5RP33032 325 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 ZNF137PP52743 207 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 AKR1C2P52895 323 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 NKX2-5P52952 324 aaPredicted RBP8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 RPL39P5Q59GN2 51 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 Q5BKY6 102 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 DHRS7BQ6IAN0 325 aaPredicted RBP8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 ZNF833PQ6ZTB9 187 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 ZNF546Q86UE3 836 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 ODF3L1Q8IXM7 274 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 OR4S2Q8NH73 311 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 GPR146Q96CH1 333 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 PERPQ96FX8 193 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 C5orf30Q96GV9 206 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 UNKLQ9H9P5 680 aaKnown RBP8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 CACFD1Q9UGQ2 172 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 MMP24Q9Y5R2 645 aa8.58□□□□□ -1.04
CHMP1B-202ENST00000588284 YLPM1P49750 1951 aaKnown RBP8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 USF3Q68DE3 2245 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 FXYD6-FXYD2A0A087WZ82 144 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 IGHV2-26A0A0B4J1V2 119 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 IGHV2-70DA0A0C4DH43 119 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 MPTX1A8MV57 137 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 KIAA1324LA8MWY0 1029 aaPredicted RBP8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 G3V3Q6 166 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 L7N2F9 121 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 TXNL1O43396 289 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 FCGR3BO75015 233 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 HRASP01112 189 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 APOA2P02652 100 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 GAPDHP04406 335 aaKnown RBP8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 PVALBP20472 110 aaPredicted RBP8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 EPHA1P21709 976 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 ZFP36P26651 326 aaKnown RBP8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 ERVK-16P61578 105 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 RTL8BQ17RB0 113 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 CLEC12BQ2HXU8 276 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 NMSQ5H8A3 153 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 PRSS54Q6PEW0 395 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 INO80EQ8NBZ0 244 aaPredicted RBP8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 OR11H6Q8NGC7 330 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 OR11H4Q8NGC9 324 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 OR1S1Q8NH92 325 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 DDB2Q92466 427 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 PCGF1Q9BSM1 259 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 COA4Q9NYJ1 87 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 DOCK11Q5JSL3 2073 aa8.57□□□□□ -1.04
CHMP1B-202ENST00000588284 MALRD1Q5VYJ5 2156 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 TRAV14DV4A0A0A6YYC5 116 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 A0A0D9SG52 128 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 FAM90A9PA6NNJ1 464 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 KRASP01116 189 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 IGKV1-39P01597 117 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 IGLV1-47P01700 117 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 IGKV1D-39P04432 117 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 CT45A6P0DMU7 189 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 CT45A5P0DMU8 189 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 CT45A7P0DMV0 189 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 LYL1P12980 280 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 MMP9P14780 707 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 NQO2P16083 231 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 CEACAM3P40198 252 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 NKX2-1P43699 371 aaPredicted RBP8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 LCN2P80188 198 aa8.56□□□□□ -1.04
CHMP1B-202ENST00000588284 ID3Q02535 119 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms