RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.07□□□□□ -0.8
COPS3-218ENST00000584216 PTX4Q96A99 478 aa10.07□□□□□ -0.8
COPS3-218ENST00000584216 GGTLC1Q9BX51 225 aa10.07□□□□□ -0.8
COPS3-218ENST00000584216 TMEM59Q9BXS4 323 aa10.07□□□□□ -0.8
COPS3-218ENST00000584216 C11orf54Q9H0W9 315 aaPredicted RBP10.07□□□□□ -0.8
COPS3-218ENST00000584216 ZC4H2Q9NQZ6 224 aa10.07□□□□□ -0.8
COPS3-218ENST00000584216 SLC35D1Q9NTN3 355 aa10.07□□□□□ -0.8
COPS3-218ENST00000584216 TNCP24821 2201 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 MPPED1O15442 326 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 ATP5HO75947 161 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 TAGLNQ01995 201 aaKnown RBP10.06□□□□□ -0.8
COPS3-218ENST00000584216 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
COPS3-218ENST00000584216 DEFB114Q30KQ6 69 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 GLT8D1Q68CQ7 371 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
COPS3-218ENST00000584216 PGLYRP3Q96LB9 341 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 HARBI1Q96MB7 349 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 DERL3Q96Q80 235 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 PARP12Q9H0J9 701 aaKnown RBP10.06□□□□□ -0.8
COPS3-218ENST00000584216 WFDC10AQ9H1F0 79 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 PLEKHJ1Q9NW61 149 aa10.06□□□□□ -0.8
COPS3-218ENST00000584216 DIMT1Q9UNQ2 313 aaKnown RBP10.06□□□□□ -0.8
COPS3-218ENST00000584216 LOC102724200A0A096LPH7 203 aaPredicted RBP10.05□□□□□ -0.8
COPS3-218ENST00000584216 TRBV6-6A0A0A6YYG2 114 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 M0R1X1 148 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 BMPR1BO00238 502 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 DYNC1I1O14576 645 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 OR9G9P0C7N8 305 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 KIR2DS2P43631 304 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 RPS27AP62979 156 aaKnown RBP10.05□□□□□ -0.8
COPS3-218ENST00000584216 HLA-DRB3P79483 266 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 SSBP2P81877 361 aaPredicted RBP10.05□□□□□ -0.8
COPS3-218ENST00000584216 RHOGP84095 191 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 DEFA5Q01523 94 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 ATP5G2Q06055 141 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 PJVKQ0ZLH3 352 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 TTC23Q5W5X9 447 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 ADAD2Q8NCV1 583 aaKnown RBP10.05□□□□□ -0.8
COPS3-218ENST00000584216 KCNG3Q8TAE7 436 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 APH1BQ8WW43 257 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 PYDC1Q8WXC3 89 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 C9orf16Q9BUW7 83 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 OR1A1Q9P1Q5 309 aa10.05□□□□□ -0.8
COPS3-218ENST00000584216 MSGN1A6NI15 193 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 SHOXO15266 292 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 CREBL2O60519 120 aaPredicted RBP10.04□□□□□ -0.8
COPS3-218ENST00000584216 LALBAP00709 142 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 IGLV2-23P01705 113 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 CRYGBP07316 175 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 FOLR2P14207 255 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
COPS3-218ENST00000584216 ATF4P18848 351 aaPredicted RBP10.04□□□□□ -0.8
COPS3-218ENST00000584216 TNFRSF9Q07011 255 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 RTL8BQ17RB0 113 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 VMA21Q3ZAQ7 101 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 ZFP1Q6P2D0 407 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 TMEM217Q8N7C4 229 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 CYYR1Q96J86 154 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 TM2D1Q9BX74 207 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 ZNF230Q9UIE0 474 aaPredicted RBP10.04□□□□□ -0.8
COPS3-218ENST00000584216 TP53TG1Q9Y2A0 90 aa10.04□□□□□ -0.8
COPS3-218ENST00000584216 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.03□□□□□ -0.8
COPS3-218ENST00000584216 C2orf70A6NJV1 201 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 LGALS9O00182 355 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 GGCTO75223 188 aaKnown RBP10.03□□□□□ -0.8
COPS3-218ENST00000584216 PROP1O75360 226 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 RRASP10301 218 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 HTR2CP28335 458 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 BMI1P35226 326 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 SERPINB10P48595 397 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 SMN1Q16637 294 aaKnown RBP10.03□□□□□ -0.8
COPS3-218ENST00000584216 WFDC3Q8IUB2 231 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 ZFP41Q8N8Y5 198 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 NECAP1Q8NC96 275 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 ZNF555Q8NEP9 628 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 OR52B4Q8NGK2 314 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 WDR89Q96FK6 387 aaPredicted RBP10.03□□□□□ -0.8
COPS3-218ENST00000584216 TMEM80Q96HE8 168 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 AKIP1Q9NQ31 210 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 C12orf4Q9NQ89 552 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 HERC2O95714 4834 aa10.03□□□□□ -0.8
COPS3-218ENST00000584216 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 ACTL6BO94805 426 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 BPNT1O95861 308 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 CD1AP06126 327 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 APELAP0DMC3 54 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 APOC4P55056 127 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 LINC00205P59089 165 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 TPBGQ13641 420 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 TNXAQ16473 311 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 ZNF57Q68EA5 555 aaPredicted RBP10.02□□□□□ -0.81
COPS3-218ENST00000584216 SLC25A42Q86VD7 318 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 RPP25LQ8N5L8 163 aaKnown RBP10.02□□□□□ -0.81
COPS3-218ENST00000584216 TEX45Q8NA69 505 aa10.02□□□□□ -0.81
COPS3-218ENST00000584216 SRSF12Q8WXF0 261 aaKnown RBP10.02□□□□□ -0.81
COPS3-218ENST00000584216 SPIN2AQ99865 258 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms