RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 PIPOXQ9P0Z9 390 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 MGAT4CQ9UBM8 478 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 C14orf166Q9Y224 244 aaKnown RBP8.89□□□□□ -0.99
TOP3A-216ENST00000583804 FAM96BQ9Y3D0 163 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 OR2W1Q9Y3N9 320 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 SOX21Q9Y651 276 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-216ENST00000583804 U3KQ87 197 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 HIVEP2P31629 2446 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 ODF3BA8MYP8 253 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 SLC22A5O76082 557 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 IGLV1-47P01700 117 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 SRD5A1P18405 259 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 EPHA1P21709 976 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 HTR1DP28221 377 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 PIGPP57054 158 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 LINC00205P59089 165 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 BPIFB3P59826 476 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 HLA-DRB5Q30154 266 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 MIDNQ504T8 468 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 RPL39P5Q59GN2 51 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 LIN54Q6MZP7 749 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 SLC25A48Q6ZT89 311 aaKnown RBP8.89□□□□□ -0.99
TOP3A-216ENST00000583804 LHFPL4Q7Z7J7 247 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 ZDHHC22Q8N966 263 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 ZNF439Q8NDP4 499 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 BEND2Q8NDZ0 799 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 ZNF680Q8NEM1 530 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 OR8H1Q8NGG4 311 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 OR4P4Q8NGL7 312 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 SLC25A21Q9BQT8 299 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-216ENST00000583804 RTBDNQ9BSG5 229 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-216ENST00000583804 DPM3Q9P2X0 92 aa8.89□□□□□ -0.99
TOP3A-216ENST00000583804 AMMECR1Q9Y4X0 333 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-216ENST00000583804 SONP18583 2426 aaKnown RBP8.89□□□□□ -0.99
TOP3A-216ENST00000583804 A0A0U1RQK1 487 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 LEUTXA8MZ59 168 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 BUB1B-PAK6H3BSN5 160 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 IFNA7P01567 189 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 PAX6P26367 422 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 IL3RAP26951 378 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 GNRHRP30968 328 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 CEACAM3P40198 252 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 GPR12P47775 334 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 REG1BP48304 166 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 RAB7AP51149 207 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 PPP1R1AQ13522 171 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 SSX2Q16385 188 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 SP6Q3SY56 376 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 LY6G6FQ5SQ64 297 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 THOC7Q6I9Y2 204 aaKnown RBP8.88□□□□□ -0.99
TOP3A-216ENST00000583804 LINC00311Q8N616 119 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 C8orf31Q8N9H6 132 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 OR51H1Q8NH63 302 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 C17orf50Q8WW18 174 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 TMEM230Q96A57 120 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 IFI27L2Q9H2X8 130 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 GPR132Q9UNW8 380 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 TBL2Q9Y4P3 447 aaKnown RBP8.88□□□□□ -0.99
TOP3A-216ENST00000583804 HILPDAQ9Y5L2 63 aa8.88□□□□□ -0.99
TOP3A-216ENST00000583804 TEX13DA0A0J9YY54 714 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-216ENST00000583804 HMSDA8MTL9 139 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 HLA-AP01891 365 aaKnown RBP8.87□□□□□ -0.99
TOP3A-216ENST00000583804 CTSDP07339 412 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-216ENST00000583804 LDLRAD2Q5SZI1 272 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 MINOS1Q5TGZ0 78 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 TBC1D26Q86UD7 250 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 SLC38A6Q8IZM9 456 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 DRAM1Q8N682 238 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 RPEQ96AT9 228 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 RSRP1Q9BUV0 290 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 TOLLIPQ9H0E2 274 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 SLC2A9Q9NRM0 540 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 MINOS1-NBL1R4GNA1 71 aa8.87□□□□□ -0.99
TOP3A-216ENST00000583804 C2CD3Q4AC94 2353 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 SAA2-SAA4A0A096LPE2 208 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 M0R1X1 148 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 GPR31O00270 319 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 ITGB1BP1O14713 200 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 IGLV2-14P01704 120 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 OR4E1P0C645 316 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 SAA2P0DJI9 122 aaPredicted RBP8.86□□□□□ -0.99
TOP3A-216ENST00000583804 RIPPLY3P57055 190 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 SCGB2A2Q13296 93 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 DIAPH2-AS1Q14236 149 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 DEFB112Q30KQ8 113 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 CLLU1Q5K131 121 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 TPTE2P1Q5T6R2 138 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 SLC25A42Q86VD7 318 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 ZDHHC16Q969W1 377 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 MALSU1Q96EH3 234 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 AGMATQ9BSE5 352 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 SDHAF2Q9NX18 166 aa8.86□□□□□ -0.99
TOP3A-216ENST00000583804 MDFIC2A0A1B0GVS7 189 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 LY6LH3BQJ8 138 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 RAB29O14966 203 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 TSC22D2O75157 780 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 CRLF1O75462 422 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 MPC2O95563 127 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 FBP1P09467 338 aa8.85□□□□□ -0.99
TOP3A-216ENST00000583804 OR5AC1P0C628 307 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms