RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 TRAV1-2A0A0B4J238 106 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 IGHV3-35A0A0C4DH35 117 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 A0A1B0GW64 132 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TVP23AA6NH52 213 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 LYRM9A8MSI8 78 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 UMAD1C9J7I0 102 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 C9JQL5 133 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 K7EN84 100 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 MANBAO00462 879 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 FAAHO00519 579 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TNFSF11O14788 317 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TAAR5O14804 337 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 HCRTR1O43613 425 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TNFSF13O75888 250 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 MMP23AO75900 390 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TNFSF15O95150 251 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 CATP04040 527 aaKnown RBP3.69□□□□□ -1.82
SS18-223ENST00000583595 OR4A8P0C604 315 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 SLC35G6P0C7Q6 338 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 LIMS3P0CW19 117 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 LIMS4P0CW20 117 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR5H8P0DN80 308 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 GTF2F2P13984 249 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 ZNF7P17097 686 aaPredicted RBP3.69□□□□□ -1.82
SS18-223ENST00000583595 CELP19835 753 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 SULT1A2P50226 295 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 RND2P52198 227 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 CRIP2P52943 208 aaPredicted RBP3.69□□□□□ -1.82
SS18-223ENST00000583595 CDKN2DP55273 166 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 SMIM11AP58511 58 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 UBE2KP61086 200 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 HBA1P69905 142 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR4D1Q15615 310 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OCIAD2Q56VL3 154 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 MARC1Q5VT66 337 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 C2orf66Q6UXQ4 117 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 SLC25A42Q86VD7 318 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 VKORC1L1Q8N0U8 176 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 LINC00471Q8N535 108 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TMEM252Q8N6L7 170 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 CCDC71LQ8N9Z2 235 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 MDS2Q8NDY4 140 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 ZNF738Q8NE65 137 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR10G3Q8NGC4 313 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR5L1Q8NGL2 311 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR13C4Q8NGS5 318 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR6N1Q8NGY5 312 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR1P1Q8NH06 330 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR5AK2Q8NH90 309 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 CASTOR1Q8WTX7 329 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 C11orf40Q8WZ69 217 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 RASL10AQ92737 203 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TMEM106AQ96A25 262 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TMEM159Q96B96 161 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 FGGYQ96C11 551 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 ACY3Q96HD9 319 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 VSIG2Q96IQ7 327 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 LINC00479Q96M42 142 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OPRPNQ99935 248 aaPredicted RBP3.69□□□□□ -1.82
SS18-223ENST00000583595 SLC17A9Q9BYT1 436 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 Q9H3A6 140 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 MFSD1Q9H3U5 465 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 ACER3Q9NUN7 267 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 TVP23BQ9NYZ1 205 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR5AC2Q9NZP5 309 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 ANGPT4Q9Y264 503 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 FARSAQ9Y285 508 aaKnown RBP3.69□□□□□ -1.82
SS18-223ENST00000583595 ZNF337Q9Y3M9 751 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 OR51B4Q9Y5P0 310 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 ENPP4Q9Y6X5 453 aa3.69□□□□□ -1.82
SS18-223ENST00000583595 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 TRBV6-7A0A0A0MS04 114 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 TGIF2-C20orf24A0A0A6YYL0 155 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 A6NIN4 97 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 GJE1A6NN92 205 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 CYSRT1A8MQ03 144 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 B4DEV8 164 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 H7C423 109 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 AGPAT2O15120 278 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 TBL1XO60907 577 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 TRGC2P03986 189 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 LIPCP11150 499 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 GABRG2P18507 467 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 ATF1P18846 271 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 RPS12P25398 132 aaKnown RBP3.68□□□□□ -1.82
SS18-223ENST00000583595 CD34P28906 385 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 S100A7P31151 101 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 SNCAP37840 140 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 POLR2HP52434 150 aaKnown RBP3.68□□□□□ -1.82
SS18-223ENST00000583595 SLC25A1P53007 311 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 EMP2P54851 167 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 TAS2R43P59537 309 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 RPL38P63173 70 aaKnown RBP3.68□□□□□ -1.82
SS18-223ENST00000583595 SLC35A1P78382 337 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 SSBP1Q04837 148 aaKnown RBP3.68□□□□□ -1.82
SS18-223ENST00000583595 PRDX4Q13162 271 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 ELOBQ15370 118 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 ZNF726P1Q15940 193 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 MORN2Q502X0 79 aa3.68□□□□□ -1.82
SS18-223ENST00000583595 C1orf100Q5SVJ3 147 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms