RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 COL7A1Q02388 2944 aa7.58□□□□□ -1.2
TOP3A-211ENST00000581536 TRBV6-7A0A0A0MS04 114 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 METTL21EPA6NDL7 271 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 RRHO14718 337 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 ATP6V0E1O15342 81 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 NDUFA3O95167 84 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 IGHG4P01861 327 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 IGKV1-16P04430 117 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 IGF1P05019 195 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
TOP3A-211ENST00000581536 TALDO1P37837 337 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 MRPS15P82914 257 aaKnown RBP7.57□□□□□ -1.2
TOP3A-211ENST00000581536 NDPQ00604 133 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 PSG5Q15238 335 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 ZNF260Q3ZCT1 412 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 IDNKQ5T6J7 187 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 FAM71F2Q6NXP2 309 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 SFXN4Q6P4A7 337 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 ZNF695Q8IW36 515 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 OR5AN1Q8NGI8 311 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 OR10J5Q8NHC4 309 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 LGALS14Q8TCE9 139 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 OR51J1Q9H342 316 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 PARP11Q9NR21 331 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 AURKAIP1Q9NWT8 199 aaPredicted RBP7.57□□□□□ -1.2
TOP3A-211ENST00000581536 SDHAF2Q9NX18 166 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 ZNF221Q9UK13 617 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 TNCP24821 2201 aa7.57□□□□□ -1.2
TOP3A-211ENST00000581536 TMEM235A6NFC5 223 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 M0R1X1 148 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 CCL24O00175 119 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 SSX5O60225 188 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 SOX15O60248 233 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 HLA-DRB1P01911 266 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 PTHLHP12272 177 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 VDAC1P21796 283 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 PSMB8P28062 276 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 MC5RP33032 325 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 MYCNOSP40205 109 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 RANBP1P43487 201 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 CDX1P47902 265 aaPredicted RBP7.56□□□□□ -1.2
TOP3A-211ENST00000581536 RPS16P62249 146 aaKnown RBP7.56□□□□□ -1.2
TOP3A-211ENST00000581536 LSM3P62310 102 aaKnown RBP7.56□□□□□ -1.2
TOP3A-211ENST00000581536 CX3CL1P78423 397 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 FOXE3Q13461 319 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 KCTD21Q4G0X4 260 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 CXorf66Q5JRM2 361 aaPredicted RBP7.56□□□□□ -1.2
TOP3A-211ENST00000581536 HACD4Q5VWC8 232 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 COMMD1Q8N668 190 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 RNF152Q8N8N0 203 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 NUDCD2Q8WVJ2 157 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 OR5B12Q96R08 314 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 P2RX4Q99571 388 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 FAM103A1Q9BTL3 118 aaKnown RBP7.56□□□□□ -1.2
TOP3A-211ENST00000581536 GON7Q9BXV9 100 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 GHITMQ9H3K2 345 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 GNB4Q9HAV0 340 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 KIAA1456Q9P272 454 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 WASHC3Q9Y3C0 194 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 NUBP2Q9Y5Y2 271 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 A3GALT2U3KPV4 340 aa7.56□□□□□ -1.2
TOP3A-211ENST00000581536 TRAV41A0A0B4J266 112 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 WI2-2373I1.2A0A1W2PRP0 233 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 OR5H14A6NHG9 310 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 SRRM4A7MD48 611 aaKnown RBP7.55□□□□□ -1.2
TOP3A-211ENST00000581536 TFAP2AP05549 437 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 FCER2P06734 321 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 ELANEP08246 267 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 RPS19P39019 145 aaKnown RBP7.55□□□□□ -1.2
TOP3A-211ENST00000581536 RAB25P57735 213 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 PJVKQ0ZLH3 352 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 KIR2DS1Q14954 304 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 PLGLAQ15195 96 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 SRSF7Q16629 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
TOP3A-211ENST00000581536 C19orf54Q5BKX5 351 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 ZNF660Q6AZW8 331 aaPredicted RBP7.55□□□□□ -1.2
TOP3A-211ENST00000581536 H1FOOQ8IZA3 346 aaPredicted RBP7.55□□□□□ -1.2
TOP3A-211ENST00000581536 ZNF491Q8N8L2 437 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 MINDY2Q8NBR6 621 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 BVESQ8NE79 360 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 TSPAN14Q8NG11 270 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 SLC25A38Q96DW6 304 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 YIPF6Q96EC8 236 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 CABLES2Q9BTV7 478 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 OR2D2Q9H210 308 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.55□□□□□ -1.2
TOP3A-211ENST00000581536 SLC35D1Q9NTN3 355 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 NECAP2Q9NVZ3 263 aa7.55□□□□□ -1.2
TOP3A-211ENST00000581536 METTL1Q9UBP6 276 aaKnown RBP7.55□□□□□ -1.2
TOP3A-211ENST00000581536 TRAV18A0A075B6X5 111 aa7.54□□□□□ -1.2
TOP3A-211ENST00000581536 A0A1W2PN81 502 aa7.54□□□□□ -1.2
TOP3A-211ENST00000581536 LINC00473A8K010 186 aa7.54□□□□□ -1.2
TOP3A-211ENST00000581536 K7EIL1 84 aa7.54□□□□□ -1.2
TOP3A-211ENST00000581536 ARPC1BO15143 372 aaKnown RBP7.54□□□□□ -1.2
TOP3A-211ENST00000581536 SLC25A17O43808 307 aa7.54□□□□□ -1.2
TOP3A-211ENST00000581536 IGLV2-23P01705 113 aa7.54□□□□□ -1.2
TOP3A-211ENST00000581536 CRYGBP07316 175 aa7.54□□□□□ -1.2
TOP3A-211ENST00000581536 NFYAP23511 347 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-211ENST00000581536 CHRNA7P36544 502 aa7.54□□□□□ -1.2
TOP3A-211ENST00000581536 SERPINB10P48595 397 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms