RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ANKRD13BQ86YJ7 626 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 PDPNQ86YL7 162 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 POC5Q8NA72 575 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 TMEM68Q96MH6 324 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 HDHD3Q9BSH5 251 aaPredicted RBP8.11□□□□□ -1.11
RFFL-209ENST00000581265 MND1Q9BWT6 205 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 C12orf4Q9NQ89 552 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 IGKV1-6A0A0C4DH72 117 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 C13orf42A0A1B0GVH6 325 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 SLC25A17O43808 307 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 CRYGBP07316 175 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 ARSBP15848 533 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 VEGFCP49767 419 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 HAPLN4Q86UW8 402 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 SGPP2Q8IWX5 399 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.1□□□□□ -1.11
RFFL-209ENST00000581265 OR5T1Q8NG75 326 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 OR9G4Q8NGQ1 327 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 GRPEL2Q8TAA5 225 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 ISOC1Q96CN7 298 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 ZNF355PQ9NSJ1 428 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 LSM2Q9Y333 95 aaKnown RBP8.1□□□□□ -1.11
RFFL-209ENST00000581265 SACSQ9NZJ4 4579 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 DNAH1Q9P2D7 4330 aa8.1□□□□□ -1.11
RFFL-209ENST00000581265 TRDCB7Z8K6 153 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 PTGES3LE9PB15 166 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 H0Y980 276 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 SLC17A2O00624 439 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 CNIH1O95406 144 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 IGLV2-23P01705 113 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 APOA2P02652 100 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 SERPINB10P48595 397 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 PJVKQ0ZLH3 352 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 ARHGAP5-AS1Q96IT6 56 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 GFI1Q99684 422 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 CMSS1Q9BQ75 279 aaKnown RBP8.09□□□□□ -1.11
RFFL-209ENST00000581265 RSRP1Q9BUV0 290 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 PLGRKTQ9HBL7 147 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 RDH8Q9NYR8 311 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 SIGLEC8Q9NYZ4 499 aa8.09□□□□□ -1.11
RFFL-209ENST00000581265 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 M0R1X1 148 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 CASQ2O14958 399 aaPredicted RBP8.08□□□□□ -1.12
RFFL-209ENST00000581265 AADACP22760 399 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 TAGLNQ01995 201 aaKnown RBP8.08□□□□□ -1.12
RFFL-209ENST00000581265 TPBGQ13641 420 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 IRF3Q14653 427 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 RCN1Q15293 331 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 P2RY14Q15391 338 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 HAGHQ16775 308 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 TATDN3Q17R31 274 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 PLAC9Q5JTB6 97 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 OGFRL1Q5TC84 451 aaPredicted RBP8.08□□□□□ -1.12
RFFL-209ENST00000581265 LIPKQ5VXJ0 399 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 ZNF343Q6P1L6 599 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 TMEM91Q6ZNR0 172 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 OR4A4PQ8NGN8 299 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 TMEM203Q969S6 136 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 USMG5Q96IX5 58 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 SPATA25Q9BR10 227 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 THAP7Q9BT49 309 aaPredicted RBP8.08□□□□□ -1.12
RFFL-209ENST00000581265 PECRQ9BY49 303 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 TINAGL1Q9GZM7 467 aaPredicted RBP8.08□□□□□ -1.12
RFFL-209ENST00000581265 SLC35D1Q9NTN3 355 aa8.08□□□□□ -1.12
RFFL-209ENST00000581265 PEF1Q9UBV8 284 aaKnown RBP8.08□□□□□ -1.12
RFFL-209ENST00000581265 AK6Q9Y3D8 172 aaKnown RBP8.08□□□□□ -1.12
RFFL-209ENST00000581265 SRRM4A7MD48 611 aaKnown RBP8.07□□□□□ -1.12
RFFL-209ENST00000581265 ARL6IP5O75915 188 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 DIRAS3O95661 229 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 CSN3P07498 182 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 RANBP1P43487 201 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 MECP2P51608 486 aaKnown RBP8.07□□□□□ -1.12
RFFL-209ENST00000581265 SYNJ2BPP57105 145 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 MED22Q15528 200 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 TRAM1Q15629 374 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 RAB11BQ15907 218 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 C2orf76Q3KRA6 126 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 TMEM177Q53S58 311 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 OR56B1Q8NGI3 324 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 DDB2Q92466 427 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 UFD1Q92890 307 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 FAM3DQ96BQ1 224 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 SDHAF2Q9NX18 166 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 KCNK7Q9Y2U2 307 aa8.07□□□□□ -1.12
RFFL-209ENST00000581265 TRBV6-7A0A0A0MS04 114 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 MSGN1A6NI15 193 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 FABP7O15540 132 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 DENRO43583 198 aaKnown RBP8.06□□□□□ -1.12
RFFL-209ENST00000581265 OR2A4O95047 310 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 IFNA6P05013 189 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 PSMA1P25786 263 aaKnown RBP8.06□□□□□ -1.12
RFFL-209ENST00000581265 PSMD7P51665 324 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 DYRK1AQ13627 763 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 MRGPRG-AS1Q2M3A8 158 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 IGSF11Q5DX21 431 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 TEX45Q8NA69 505 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 OR10J5Q8NHC4 309 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 SNAPC3Q92966 411 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 HARBI1Q96MB7 349 aa8.06□□□□□ -1.12
RFFL-209ENST00000581265 SCN3BQ9NY72 215 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms