RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 ELK1P19419 428 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 SPCS2Q15005 226 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 KHDC1LQ5JSQ8 128 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 PDPNQ86YL7 162 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 OR51J1Q9H342 316 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 SLC35D1Q9NTN3 355 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 ZNF580Q9UK33 172 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 RBM7Q9Y580 266 aaKnown RBP15.78■□□□□ 0.12
SS18-218ENST00000581021 G3V318 75 aa15.77■□□□□ 0.12
SS18-218ENST00000581021 APOA1P02647 267 aa15.77■□□□□ 0.12
SS18-218ENST00000581021 APOA2P02652 100 aa15.77■□□□□ 0.12
SS18-218ENST00000581021 DUTP33316 252 aaKnown RBP15.77■□□□□ 0.12
SS18-218ENST00000581021 RORCP51449 518 aa15.77■□□□□ 0.12
SS18-218ENST00000581021 RPL23AP62750 156 aaKnown RBP15.77■□□□□ 0.12
SS18-218ENST00000581021 LIN54Q6MZP7 749 aa15.77■□□□□ 0.12
SS18-218ENST00000581021 PARP11Q9NR21 331 aa15.77■□□□□ 0.12
SS18-218ENST00000581021 KIAA1456Q9P272 454 aa15.77■□□□□ 0.12
SS18-218ENST00000581021 WSB1Q9Y6I7 421 aa15.77■□□□□ 0.12
SS18-218ENST00000581021 NOTCH3Q9UM47 2321 aa15.77■□□□□ 0.11
SS18-218ENST00000581021 EGR2P11161 476 aaPredicted RBP15.76■□□□□ 0.11
SS18-218ENST00000581021 AADACP22760 399 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 LUMP51884 338 aaPredicted RBP15.76■□□□□ 0.11
SS18-218ENST00000581021 ARPC4P59998 168 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 SSBP2P81877 361 aaPredicted RBP15.76■□□□□ 0.11
SS18-218ENST00000581021 EIF4EBP1Q13541 118 aaPredicted RBP15.76■□□□□ 0.11
SS18-218ENST00000581021 C19orf54Q5BKX5 351 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 ETV3LQ6ZN32 361 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 CLVS1Q8IUQ0 354 aaPredicted RBP15.76■□□□□ 0.11
SS18-218ENST00000581021 ZNF645Q8N7E2 425 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 BVESQ8NE79 360 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 OR4F17Q8NGA8 305 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 OR4F4Q96R69 305 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 RNF5Q99942 180 aa15.76■□□□□ 0.11
SS18-218ENST00000581021 METTL1Q9UBP6 276 aaKnown RBP15.76■□□□□ 0.11
SS18-218ENST00000581021 SRRM4A7MD48 611 aaKnown RBP15.75■□□□□ 0.11
SS18-218ENST00000581021 RPLP1P05386 114 aaKnown RBP15.75■□□□□ 0.11
SS18-218ENST00000581021 PPIFP30405 207 aaKnown RBP15.75■□□□□ 0.11
SS18-218ENST00000581021 THBS3P49746 956 aa15.75■□□□□ 0.11
SS18-218ENST00000581021 RPS16P62249 146 aaKnown RBP15.75■□□□□ 0.11
SS18-218ENST00000581021 RPL30P62888 115 aaKnown RBP15.75■□□□□ 0.11
SS18-218ENST00000581021 SLC35B1P78383 322 aa15.75■□□□□ 0.11
SS18-218ENST00000581021 CX3CL1P78423 397 aa15.75■□□□□ 0.11
SS18-218ENST00000581021 C1QL4Q86Z23 238 aa15.75■□□□□ 0.11
SS18-218ENST00000581021 RNF152Q8N8N0 203 aa15.75■□□□□ 0.11
SS18-218ENST00000581021 ACOT12Q8WYK0 555 aa15.75■□□□□ 0.11
SS18-218ENST00000581021 FLYWCH2Q96CP2 140 aaKnown RBP15.75■□□□□ 0.11
SS18-218ENST00000581021 GPHA2Q96T91 129 aa15.75■□□□□ 0.11
SS18-218ENST00000581021 RBMX2Q9Y388 322 aaKnown RBP15.75■□□□□ 0.11
SS18-218ENST00000581021 SLC25A17O43808 307 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 SPDEFO95238 335 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 IGHG4P01861 327 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 CRYGBP07316 175 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 OR5H8P0DN80 308 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 ZNF182P17025 639 aaPredicted RBP15.74■□□□□ 0.11
SS18-218ENST00000581021 FCGR2CP31995 323 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 CBX5P45973 191 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 MRGPRG-AS1Q2M3A8 158 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 TMEM177Q53S58 311 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 TEX38Q6PEX7 206 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 COMMD1Q8N668 190 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 CMTM3Q96MX0 182 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 CLCC1Q96S66 551 aa15.74■□□□□ 0.11
SS18-218ENST00000581021 G3V4G9 280 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 CA2P00918 260 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 NAT1P18440 290 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 VDAC1P21796 283 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 PSMB8P28062 276 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 PJVKQ0ZLH3 352 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 FOXE3Q13461 319 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 PLGLAQ15195 96 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 C8orf86Q6ZUL3 223 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 OR5AP2Q8NGF4 316 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 GPX8Q8TED1 209 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 TSNAXQ99598 290 aaKnown RBP15.73■□□□□ 0.11
SS18-218ENST00000581021 KLK15Q9H2R5 256 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 IFT46Q9NQC8 304 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 NECAP2Q9NVZ3 263 aa15.73■□□□□ 0.11
SS18-218ENST00000581021 MRPS7Q9Y2R9 242 aaKnown RBP15.73■□□□□ 0.11
SS18-218ENST00000581021 TRAV41A0A0B4J266 112 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 ARPC1BO15143 372 aaKnown RBP15.72■□□□□ 0.11
SS18-218ENST00000581021 SOX15O60248 233 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 PPYP01298 95 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 PF4V1P10720 104 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 PRSS3P35030 304 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 RPL5P46777 297 aaKnown RBP15.72■□□□□ 0.11
SS18-218ENST00000581021 CRIP2P52943 208 aaPredicted RBP15.72■□□□□ 0.11
SS18-218ENST00000581021 BRWD1-AS2P59051 145 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 CDK10Q15131 360 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 OR2B11Q5JQS5 317 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 ZNF660Q6AZW8 331 aaPredicted RBP15.72■□□□□ 0.11
SS18-218ENST00000581021 SNX29P2Q8IUI4 249 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 MYOZ3Q8TDC0 251 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 ADTRPQ96IZ2 230 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 HARBI1Q96MB7 349 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 FAM103A1Q9BTL3 118 aaKnown RBP15.72■□□□□ 0.11
SS18-218ENST00000581021 MIXL1Q9H2W2 232 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 CCL28Q9NRJ3 127 aa15.72■□□□□ 0.11
SS18-218ENST00000581021 CRYZL1O95825 349 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 IGLV1-40P01703 118 aa15.71■□□□□ 0.11
SS18-218ENST00000581021 ELANEP08246 267 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms