RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 ARSJQ5FYB0 599 aaPredicted RBP12.24□□□□□ -0.45
IFT20-208ENST00000578985 C9orf152Q5JTZ5 239 aa12.24□□□□□ -0.45
IFT20-208ENST00000578985 DHRS11Q6UWP2 260 aa12.24□□□□□ -0.45
IFT20-208ENST00000578985 SECTM1Q8WVN6 248 aa12.24□□□□□ -0.45
IFT20-208ENST00000578985 ADTRPQ96IZ2 230 aa12.24□□□□□ -0.45
IFT20-208ENST00000578985 RITA1Q96K30 269 aa12.24□□□□□ -0.45
IFT20-208ENST00000578985 SLC5A7Q9GZV3 580 aa12.24□□□□□ -0.45
IFT20-208ENST00000578985 RBMX2Q9Y388 322 aaKnown RBP12.24□□□□□ -0.45
IFT20-208ENST00000578985 A6NHS1 94 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 HAX1O00165 279 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 IGLV2-14P01704 120 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 DUTP33316 252 aaKnown RBP12.23□□□□□ -0.45
IFT20-208ENST00000578985 SSBP1Q04837 148 aaKnown RBP12.23□□□□□ -0.45
IFT20-208ENST00000578985 MMDQ15546 238 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 ZNF660Q6AZW8 331 aaPredicted RBP12.23□□□□□ -0.45
IFT20-208ENST00000578985 Q8N9W7 124 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 OR6F1Q8NGZ6 308 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 SMIM4Q8WVI0 70 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 RASL11BQ9BPW5 248 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 ZNF2Q9BSG1 426 aaPredicted RBP12.23□□□□□ -0.45
IFT20-208ENST00000578985 ZNF747Q9BV97 191 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 CCL28Q9NRJ3 127 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 SLC35D1Q9NTN3 355 aa12.23□□□□□ -0.45
IFT20-208ENST00000578985 M0QYG6 137 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 TBPP20226 339 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 CNTFRP26992 372 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 VDAC2P45880 294 aaPredicted RBP12.22□□□□□ -0.45
IFT20-208ENST00000578985 TSPAN5P62079 268 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 TAGLNQ01995 201 aaKnown RBP12.22□□□□□ -0.45
IFT20-208ENST00000578985 MSMO1Q15800 293 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 VAX1Q5SQQ9 334 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 TMEM17Q86X19 198 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 PDPNQ86YL7 162 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 TMEM229BQ8NBD8 167 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 BVESQ8NE79 360 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 MOB3AQ96BX8 217 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 SERTAD4Q9NUC0 356 aa12.22□□□□□ -0.45
IFT20-208ENST00000578985 LIN7CQ9NUP9 197 aaKnown RBP12.22□□□□□ -0.45
IFT20-208ENST00000578985 NBR2O15453 112 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 GSTZ1O43708 216 aaPredicted RBP12.21□□□□□ -0.45
IFT20-208ENST00000578985 CD3DP04234 171 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 IGKV1-16P04430 117 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 RRASP10301 218 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 TAS2R19P59542 299 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 RPS16P62249 146 aaKnown RBP12.21□□□□□ -0.45
IFT20-208ENST00000578985 CBX3Q13185 183 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 RTL8BQ17RB0 113 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 TMEM95Q3KNT9 176 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 RNASE10Q5GAN6 216 aaKnown RBP12.21□□□□□ -0.45
IFT20-208ENST00000578985 CCDC190Q86UF4 302 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 ZBTB34Q8NCN2 500 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 NPBQ8NG41 125 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 OR6Q1Q8NGQ2 317 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 DDB2Q92466 427 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 FLYWCH2Q96CP2 140 aaKnown RBP12.21□□□□□ -0.45
IFT20-208ENST00000578985 HSD17B10Q99714 261 aaKnown RBP12.21□□□□□ -0.45
IFT20-208ENST00000578985 RNF5Q99942 180 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 KIAA1456Q9P272 454 aa12.21□□□□□ -0.45
IFT20-208ENST00000578985 ZNF107Q9UII5 783 aaPredicted RBP12.21□□□□□ -0.45
IFT20-208ENST00000578985 LINC00473A8K010 186 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 IFNA6P05013 189 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 VSIG10L2P0DP72 767 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
IFT20-208ENST00000578985 EIF4EBP1Q13541 118 aaPredicted RBP12.2□□□□□ -0.46
IFT20-208ENST00000578985 PYDC2Q56P42 97 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 ZNF66Q6ZN08 573 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 KCTD9Q7L273 389 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 FAM71E2Q8N5Q1 922 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 KLHDC1Q8N7A1 406 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 TSNAXQ99598 290 aaKnown RBP12.2□□□□□ -0.46
IFT20-208ENST00000578985 TINAGL1Q9GZM7 467 aaPredicted RBP12.2□□□□□ -0.46
IFT20-208ENST00000578985 FXYD6Q9H0Q3 95 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 TAS2R8Q9NYW2 309 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 PRELID3BQ9Y3B1 194 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 V9GYH0 126 aa12.2□□□□□ -0.46
IFT20-208ENST00000578985 PLXNB1O43157 2135 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 RRHO14718 337 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 PEX14O75381 377 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 NDUFA3O95167 84 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 RAB3DO95716 219 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 CD74P04233 296 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 CSF1P09603 554 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.46
IFT20-208ENST00000578985 KRTAP10-3P60369 221 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 SRSF4Q08170 494 aaKnown RBP12.19□□□□□ -0.46
IFT20-208ENST00000578985 C5orf64Q2M2E5 130 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 SPANXN2Q5MJ10 180 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 STEAP1BQ6NZ63 245 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 SHISA2Q6UWI4 295 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 SLC35E3Q7Z769 313 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 MFSD4AQ8N468 514 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 TCTEX1D2Q8WW35 142 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 BORCS5Q969J3 196 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 GPHA2Q96T91 129 aa12.19□□□□□ -0.46
IFT20-208ENST00000578985 TNFSF12O43508 249 aa12.18□□□□□ -0.46
IFT20-208ENST00000578985 FCGR3BO75015 233 aa12.18□□□□□ -0.46
IFT20-208ENST00000578985 IGHG2P01859 326 aa12.18□□□□□ -0.46
IFT20-208ENST00000578985 GNRHRP30968 328 aa12.18□□□□□ -0.46
IFT20-208ENST00000578985 ETV6P41212 452 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms