RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FAM46BQ96A09 425 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 PPP1R14BQ96C90 147 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 RDH12Q96NR8 316 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 DERL3Q96Q80 235 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 NABP2Q9BQ15 211 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 MRPL20Q9BYC9 149 aaKnown RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 ALX4Q9H161 411 aaPredicted RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 KCNK15Q9H427 330 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 OR2S2Q9NQN1 319 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 PARP11Q9NR21 331 aa4.83□□□□□ -1.64
NUP88-212ENST00000576708 PAK1IP1Q9NWT1 392 aaPredicted RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 ZNF107Q9UII5 783 aaPredicted RBP4.83□□□□□ -1.64
NUP88-212ENST00000576708 PTGES3LE9PB15 166 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 ATP6V0E1O15342 81 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 LANCL1O43813 399 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 ATP6V1G1O75348 118 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 SC5DO75845 299 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 IGF1P05019 195 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 GNAO1P09471 354 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 CELP19835 753 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 FUT3P21217 361 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 BLVRBP30043 206 aaPredicted RBP4.82□□□□□ -1.64
NUP88-212ENST00000576708 SLC6A1P30531 599 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 ACTBP60709 375 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 SSTP61278 116 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 SUMO2P61956 95 aaKnown RBP4.82□□□□□ -1.64
NUP88-212ENST00000576708 GNB1P62873 340 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 GPR176Q14439 515 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 IGSF11Q5DX21 431 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 C6orf183Q5T699 404 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 FAM27D1Q5T7N8 215 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 C9orf66Q5T8R8 295 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 THOC7Q6I9Y2 204 aaKnown RBP4.82□□□□□ -1.64
NUP88-212ENST00000576708 C10orf67Q8IYJ2 551 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 ZNF491Q8N8L2 437 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 OR11H1Q8NG94 326 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 OR1N2Q8NGR9 330 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 C4orf3Q8WVX3 66 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 SULT4A1Q9BR01 284 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 FAAP24Q9BTP7 215 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 ABHD14AQ9BUJ0 271 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 GON7Q9BXV9 100 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 ANKRD60Q9BZ19 345 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 PARP12Q9H0J9 701 aaKnown RBP4.82□□□□□ -1.64
NUP88-212ENST00000576708 SPACA1Q9HBV2 294 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 C11orf21Q9P2W6 132 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 MBD2Q9UBB5 411 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 CKLFQ9UBR5 152 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 NKX1-2Q9UD57 310 aaPredicted RBP4.82□□□□□ -1.64
NUP88-212ENST00000576708 GAB2Q9UQC2 676 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 FBXO7Q9Y3I1 522 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 U3KQK5 164 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 RYR2Q92736 4967 aa4.82□□□□□ -1.64
NUP88-212ENST00000576708 IGHV7-81A0A0B4J1V7 117 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 TRAV41A0A0B4J266 112 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 IRGMA1A4Y4 181 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 EFCAB10A6NFE3 127 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 I3L521 148 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 FCN1O00602 326 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 SOX15O60248 233 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 RAMP3O60896 148 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 PDCD6O75340 191 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 IGLV2-14P01704 120 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 GLAP06280 429 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 HTR2CP28335 458 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 CAPGP40121 348 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 HTR2BP41595 481 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 NDPQ00604 133 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 C5orf64Q2M2E5 130 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 RPL39P5Q59GN2 51 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 RNASE12Q5GAN4 147 aaKnown RBP4.81□□□□□ -1.64
NUP88-212ENST00000576708 C6orf141Q5SZD1 244 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 TTC23Q5W5X9 447 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 TMEM65Q6PI78 240 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 FAM131AQ6UXB0 335 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 GLDNQ6ZMI3 551 aaPredicted RBP4.81□□□□□ -1.64
NUP88-212ENST00000576708 AHSA2Q719I0 299 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 C6orf201Q7Z4U5 140 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 LRRTM1Q86UE6 522 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 DHRSXQ8N5I4 330 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 BPIFB6Q8NFQ5 453 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 SETD6Q8TBK2 473 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 MYOZ3Q8TDC0 251 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 DCUN1D4Q92564 292 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 MRPS24Q96EL2 167 aaKnown RBP4.81□□□□□ -1.64
NUP88-212ENST00000576708 ZNF251Q9BRH9 671 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 NICN1Q9BSH3 213 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 HDHD3Q9BSH5 251 aaPredicted RBP4.81□□□□□ -1.64
NUP88-212ENST00000576708 OR51J1Q9H342 316 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 FBXL15Q9H469 300 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 KCNIP1Q9NZI2 227 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 MGAT4CQ9UBM8 478 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 STEAP1Q9UHE8 339 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 PSORS1C1Q9UIG5 152 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 ZNF256Q9Y2P7 627 aaPredicted RBP4.81□□□□□ -1.64
NUP88-212ENST00000576708 A3GALT2U3KPV4 340 aa4.81□□□□□ -1.64
NUP88-212ENST00000576708 DYNC2H1Q8NCM8 4307 aaKnown RBP4.81□□□□□ -1.64
NUP88-212ENST00000576708 SAA2-SAA4A0A096LPE2 208 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 A0A0A6YYD4 124 aa4.8□□□□□ -1.64
NUP88-212ENST00000576708 SERTM2A0A1B0GWG4 89 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms