RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 KRTAP1-4P0C5Y4 121 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 FGF6P10767 208 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 ESDP10768 282 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 MUC1P15941 1255 aaPredicted RBP1.31□□□□□ -2.2
CHD3-217ENST00000574022 CRABP2P29373 138 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 RPL5P46777 297 aaKnown RBP1.31□□□□□ -2.2
CHD3-217ENST00000574022 FGF12P61328 243 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 SNRPD2P62316 118 aaKnown RBP1.31□□□□□ -2.2
CHD3-217ENST00000574022 ARHGAP11BQ3KRB8 267 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 PYCR3Q53H96 274 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 TBPL2Q6SJ96 375 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 ZNF695Q8IW36 515 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 UMODL1-AS1Q8N2C9 162 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 ZNF615Q8N8J6 731 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 Q8N9L7 120 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 ST20-AS1Q8NBB2 130 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 APCDD1LQ8NCL9 501 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 OR4X1Q8NH49 305 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 HIST1H2BAQ96A08 127 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 C12orf43Q96C57 262 aaKnown RBP1.31□□□□□ -2.2
CHD3-217ENST00000574022 CPNE2Q96FN4 548 aaPredicted RBP1.31□□□□□ -2.2
CHD3-217ENST00000574022 LINC00477Q96M19 166 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 CNBD2Q96M20 576 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 NIPSNAP1Q9BPW8 284 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 C1QTNF6Q9BXI9 259 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 CXorf21Q9HAI6 301 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 CMTM6Q9NX76 183 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 MRPL27Q9P0M9 148 aaKnown RBP1.31□□□□□ -2.2
CHD3-217ENST00000574022 RPUSD1Q9UJJ7 312 aaKnown RBP1.31□□□□□ -2.2
CHD3-217ENST00000574022 ANGPT4Q9Y264 503 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 COQ4Q9Y3A0 265 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 OR51B4Q9Y5P0 310 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 ICOSQ9Y6W8 199 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 SCN4AP35499 1836 aa1.31□□□□□ -2.2
CHD3-217ENST00000574022 ADAMTS9Q9P2N4 1935 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 SYNMO15061 1565 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 HECW2Q9P2P5 1572 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 TRBV24-1A0A075B6N3 115 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 IGKV1OR2-108A0A075B7D4 117 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 TRAV26-2A0A0B4J265 109 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 A0A0B4J2C4 111 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 FAM236DA0A1B0GTK5 79 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 hADV38S2A0JD32 116 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 OR4C46A6NHA9 309 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 OR5K4A6NMS3 321 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 KNCNA6PVL3 124 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 VGLL3A8MV65 326 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 H3BMM0 161 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.3□□□□□ -2.2
CHD3-217ENST00000574022 H3BQV1 296 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 COX7A2LO14548 114 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 SLC25A20O43772 301 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 SH2D1AO60880 128 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 ATG12O94817 140 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 WISP3O95389 354 aaPredicted RBP1.3□□□□□ -2.2
CHD3-217ENST00000574022 IGHG2P01859 326 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 SERPINA7P05543 415 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 CRYGDP07320 174 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 FAM236CP0DP71 79 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 CYBAP13498 195 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 AKR1C2P52895 323 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 TAS2R45P59539 299 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 TNFAIP6P98066 277 aaPredicted RBP1.3□□□□□ -2.2
CHD3-217ENST00000574022 HOXC5Q00444 222 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 GNA12Q03113 381 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 CAV1Q03135 178 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 IL15RAQ13261 267 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 TEX36Q5VZQ5 186 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 ZNF880Q6PDB4 577 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 ADM2Q7Z4H4 148 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 OOSP2Q86WS3 158 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 SLC22A24Q8N4F4 322 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 C3orf22Q8N5N4 141 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.3□□□□□ -2.2
CHD3-217ENST00000574022 OR8B12Q8NGG6 310 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 OR2D3Q8NGH3 330 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 OR52L1Q8NGH7 329 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 OR4K13Q8NH42 304 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 ZNF721Q8TF20 911 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 RAB2BQ8WUD1 216 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 OR5P3Q8WZ94 311 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 KLK6Q92876 244 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 RAD51AP1Q96B01 352 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 UBE2WQ96B02 151 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 GNPNAT1Q96EK6 184 aaPredicted RBP1.3□□□□□ -2.2
CHD3-217ENST00000574022 SEC22CQ9BRL7 303 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 TMEM147Q9BVK8 224 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 KRTAP9-8Q9BYQ0 159 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 GPR84Q9NQS5 396 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 PRTFDC1Q9NRG1 225 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 C14orf105Q9NVL8 296 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 SLC23A2Q9UGH3 650 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 RSL24D1Q9UHA3 163 aaKnown RBP1.3□□□□□ -2.2
CHD3-217ENST00000574022 KLK12Q9UKR0 248 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 LINC00588Q9Y4M8 146 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 RTL1A6NKG5 1358 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 PLA2R1Q13018 1463 aa1.3□□□□□ -2.2
CHD3-217ENST00000574022 ZCCHC6Q5VYS8 1495 aaKnown RBP1.3□□□□□ -2.2
CHD3-217ENST00000574022 TUBGCP6Q96RT7 1819 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms