RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZNF736B4DX44 427 aaPredicted RBP8.78□□□□□ -1
CHD3-216ENST00000573936 H0YJW9 148 aa8.78□□□□□ -1
CHD3-216ENST00000573936 GABARAPH6UMI1 98 aa8.78□□□□□ -1
CHD3-216ENST00000573936 CTDSPLO15194 276 aa8.78□□□□□ -1
CHD3-216ENST00000573936 PEX14O75381 377 aa8.78□□□□□ -1
CHD3-216ENST00000573936 FCER2P06734 321 aa8.78□□□□□ -1
CHD3-216ENST00000573936 RRASP10301 218 aa8.78□□□□□ -1
CHD3-216ENST00000573936 VDAC2P45880 294 aaPredicted RBP8.78□□□□□ -1
CHD3-216ENST00000573936 THBS3P49746 956 aa8.78□□□□□ -1
CHD3-216ENST00000573936 PROK1P58294 105 aa8.78□□□□□ -1
CHD3-216ENST00000573936 DGCR2P98153 550 aa8.78□□□□□ -1
CHD3-216ENST00000573936 SSBP1Q04837 148 aaKnown RBP8.78□□□□□ -1
CHD3-216ENST00000573936 DYRK1AQ13627 763 aa8.78□□□□□ -1
CHD3-216ENST00000573936 MSMO1Q15800 293 aa8.78□□□□□ -1
CHD3-216ENST00000573936 ABCA11PQ4W5N1 156 aa8.78□□□□□ -1
CHD3-216ENST00000573936 ACTBL2Q562R1 376 aa8.78□□□□□ -1
CHD3-216ENST00000573936 PYDC2Q56P42 97 aa8.78□□□□□ -1
CHD3-216ENST00000573936 RNASE12Q5GAN4 147 aaKnown RBP8.78□□□□□ -1
CHD3-216ENST00000573936 DHRS11Q6UWP2 260 aa8.78□□□□□ -1
CHD3-216ENST00000573936 OVCH2Q7RTZ1 564 aa8.78□□□□□ -1
CHD3-216ENST00000573936 PDPNQ86YL7 162 aa8.78□□□□□ -1
CHD3-216ENST00000573936 C5orf56Q8N8D9 126 aa8.78□□□□□ -1
CHD3-216ENST00000573936 ZBTB34Q8NCN2 500 aa8.78□□□□□ -1
CHD3-216ENST00000573936 BORCS5Q969J3 196 aa8.78□□□□□ -1
CHD3-216ENST00000573936 SDHCQ99643 169 aaPredicted RBP8.78□□□□□ -1
CHD3-216ENST00000573936 EHFQ9NZC4 300 aa8.78□□□□□ -1
CHD3-216ENST00000573936 WASHC3Q9Y3C0 194 aa8.78□□□□□ -1
CHD3-216ENST00000573936 H7C2Y5 167 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 J3QRK9 145 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 GSTZ1O43708 216 aaPredicted RBP8.77□□□□□ -1.01
CHD3-216ENST00000573936 PROP1O75360 226 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 PPYP01298 95 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 PMP2P02689 132 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 AADACP22760 399 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 HLA-DMAP28067 261 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 HERV-K104P61576 105 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 ZNF846Q147U1 533 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 MMDQ15546 238 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 FBLN7Q53RD9 439 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 C9orf152Q5JTZ5 239 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 GLDNQ6ZMI3 551 aaPredicted RBP8.77□□□□□ -1.01
CHD3-216ENST00000573936 LYSMD2Q8IV50 215 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 Q8N9W7 124 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 OR52I2Q8NH67 350 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 SMIM4Q8WVI0 70 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 WDR12Q9GZL7 423 aaKnown RBP8.77□□□□□ -1.01
CHD3-216ENST00000573936 SLC35D1Q9NTN3 355 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 LIN7CQ9NUP9 197 aaKnown RBP8.77□□□□□ -1.01
CHD3-216ENST00000573936 KIAA1456Q9P272 454 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 MTFP1Q9UDX5 166 aa8.77□□□□□ -1.01
CHD3-216ENST00000573936 NBR2O15453 112 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 AMY1AP04745 511 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 AMY2AP04746 511 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 TBPP20226 339 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 DUTP33316 252 aaKnown RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 HRH1P35367 487 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 RFX2P48378 723 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 F2RL1P55085 397 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 TSPAN5P62079 268 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 RPS16P62249 146 aaKnown RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 RTL8BQ17RB0 113 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 ZNF66Q6ZN08 573 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 TMEM17Q86X19 198 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 Q8N402 240 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 GDPD1Q8N9F7 314 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 ZNF383Q8NA42 475 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 DRAXINQ8NBI3 349 aaPredicted RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 NPBQ8NG41 125 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 OR6F1Q8NGZ6 308 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 SECTM1Q8WVN6 248 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 WFDC12Q8WWY7 111 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 FLYWCH2Q96CP2 140 aaKnown RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 TSNAXQ99598 290 aaKnown RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 HSD17B10Q99714 261 aaKnown RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 ZNF2Q9BSG1 426 aaPredicted RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 SLC5A7Q9GZV3 580 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 PLSCR3Q9NRY6 295 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 SERTAD4Q9NUC0 356 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 KLK11Q9UBX7 282 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 ZNF107Q9UII5 783 aaPredicted RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 SIGLEC9Q9Y336 463 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 RBMX2Q9Y388 322 aaKnown RBP8.76□□□□□ -1.01
CHD3-216ENST00000573936 PRELID3BQ9Y3B1 194 aa8.76□□□□□ -1.01
CHD3-216ENST00000573936 IGKV1D-13A0A0B4J2D9 117 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 NDUFA3O95167 84 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 IGHG2P01859 326 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 IFNA6P05013 189 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 IGKV1-13P0DP09 117 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 VSIG10L2P0DP72 767 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 CD40LGP29965 261 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 LGALS7P47929 136 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 PPP5CP53041 499 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 TAS2R19P59542 299 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 BAK1Q16611 211 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 VAX1Q5SQQ9 334 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 LPCAT3Q6P1A2 487 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 Q6ZS46 218 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 SLC35E3Q7Z769 313 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 FOXRED2Q8IWF2 684 aa8.75□□□□□ -1.01
CHD3-216ENST00000573936 FAM71E2Q8N5Q1 922 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms