RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 MGMTP16455 207 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 PSMB8P28062 276 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 CD40LGP29965 261 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 ZNF616Q08AN1 781 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 TMEM267Q0VDI3 215 aaPredicted RBP7.2□□□□□ -1.26
CIITA-208ENST00000572665 DEFB136Q30KP8 78 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 ZNF260Q3ZCT1 412 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 MORN2Q502X0 79 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 CT45A1Q5HYN5 189 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 LY6G6FQ5SQ64 297 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 XAF1Q6GPH4 301 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 FAM71F2Q6NXP2 309 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 ZNF429Q86V71 674 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 GAPTQ8N292 157 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 TCTEX1D1Q8N7M0 179 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 ZNF439Q8NDP4 499 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 OR2AK2Q8NG84 335 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 OR10V1Q8NGI7 309 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 CT45A3Q8NHU0 189 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 UBALD1Q8TB05 177 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 NEDD4LQ96PU5 975 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 YPEL2Q96QA6 119 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 OR51J1Q9H342 316 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 TAF9BQ9HBM6 251 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 PIPOXQ9P0Z9 390 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 RNF150Q9ULK6 438 aa7.2□□□□□ -1.26
CIITA-208ENST00000572665 TRAV41A0A0B4J266 112 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 A0A1W2PP11 408 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 C3orf84H3BNL1 204 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 ARPC1BO15143 372 aaKnown RBP7.19□□□□□ -1.26
CIITA-208ENST00000572665 NBR2O15453 112 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 SLC25A17O43808 307 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 HLA-DRB1P01911 266 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 GNAO1P09471 354 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 SLC2A2P11168 524 aaPredicted RBP7.19□□□□□ -1.26
CIITA-208ENST00000572665 MYF6P23409 242 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 CHATP28329 748 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
CIITA-208ENST00000572665 F2RL1P55085 397 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 AQP4P55087 323 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 ACTBP60709 375 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 RUNX1Q01196 453 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 PYHIN1Q6K0P9 492 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 DHRSXQ8N5I4 330 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 OR1N2Q8NGR9 330 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 OR1L1Q8NH94 360 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 CYGBQ8WWM9 190 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 HSPB9Q9BQS6 159 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 PARP11Q9NR21 331 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 CNOT2Q9NZN8 540 aaKnown RBP7.19□□□□□ -1.26
CIITA-208ENST00000572665 MGAT4AQ9UM21 535 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 LSM4Q9Y4Z0 139 aaKnown RBP7.19□□□□□ -1.26
CIITA-208ENST00000572665 SMAD5-AS1Q9Y6J3 95 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
CIITA-208ENST00000572665 TRAV8-7A0A075B6U6 113 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 OR5H14A6NHG9 310 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 ZNF736B4DX44 427 aaPredicted RBP7.18□□□□□ -1.26
CIITA-208ENST00000572665 RAB29O14966 203 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 SLC31A2O15432 143 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 RCC1P18754 421 aaPredicted RBP7.18□□□□□ -1.26
CIITA-208ENST00000572665 CELP19835 753 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 MC5RP33032 325 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 WNT4P56705 351 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 ST3GAL4Q11206 333 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 PLGLAQ15195 96 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 GLT8D1Q68CQ7 371 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 ZNF660Q6AZW8 331 aaPredicted RBP7.18□□□□□ -1.26
CIITA-208ENST00000572665 MOB1BQ7L9L4 216 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 CADM3Q8N126 398 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 MS4A15Q8N5U1 240 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 ZNF491Q8N8L2 437 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 NPBQ8NG41 125 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 OR13C5Q8NGS8 318 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 PGLYRP3Q96LB9 341 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 DERL3Q96Q80 235 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 VCX3BQ9H321 246 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 RIMS4Q9H426 269 aaPredicted RBP7.18□□□□□ -1.26
CIITA-208ENST00000572665 BANF2Q9H503 90 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 ZNF581Q9P0T4 197 aa7.18□□□□□ -1.26
CIITA-208ENST00000572665 A0A1W2PPK0 400 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 MAGEA13PA6NCF6 341 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 OVOL1O14753 267 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 ATP6V0E1O15342 81 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 RBBP9O75884 186 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 EDN2P20800 178 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 VHLP40337 213 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 RAB9AP51151 201 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 RPS11P62280 158 aaKnown RBP eCLIP7.17□□□□□ -1.26
CIITA-208ENST00000572665 RBMS2Q15434 407 aaKnown RBP7.17□□□□□ -1.26
CIITA-208ENST00000572665 C5orf64Q2M2E5 130 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 LAIR2Q6ISS4 152 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 IZUMO2Q6UXV1 221 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 ZNF833PQ6ZTB9 187 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 C8orf59Q8N0T1 100 aaPredicted RBP7.17□□□□□ -1.26
CIITA-208ENST00000572665 ZFP41Q8N8Y5 198 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 OR6Q1Q8NGQ2 317 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 KCNG3Q8TAE7 436 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 MPLKIPQ8TAP9 179 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 MRPL30Q8TCC3 161 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms