RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 OR8U9P0C7N5 309 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 RAB3BP20337 219 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 TALDO1P37837 337 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 CLDN12P56749 244 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 NDPQ00604 133 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 PSG5Q15238 335 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 SSX1Q16384 188 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 C19orf54Q5BKX5 351 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 PLAC9Q5JTB6 97 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 HES5Q5TA89 166 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 UNQ5815/PRO19632Q6UWF5 114 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 PPP1R27Q86WC6 154 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 OR6Q1Q8NGQ2 317 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 OR10R2Q8NGX6 335 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 ARPC1AQ92747 370 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 ADTRPQ96IZ2 230 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 CNBD2Q96M20 576 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 OR2D2Q9H210 308 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 KLK15Q9H2R5 256 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 GNB4Q9HAV0 340 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 SLC35D1Q9NTN3 355 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 GAB2Q9UQC2 676 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 RBM7Q9Y580 266 aaKnown RBP7.57□□□□□ -1.2
CIITA-207ENST00000571545 NUBP2Q9Y5Y2 271 aa7.57□□□□□ -1.2
CIITA-207ENST00000571545 TRDV1A0A1B0GX56 115 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 M0R1X1 148 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 BET1O15155 118 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 SAP30O75446 220 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 LY86O95711 162 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 CA2P00918 260 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 CTXN2P0C2S0 81 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 HIST1H1DP16402 221 aaKnown RBP7.56□□□□□ -1.2
CIITA-207ENST00000571545 ZP3P21754 424 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 DTYMKP23919 212 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 MAP2K4P45985 399 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 TMEM50BP56557 158 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 TPPP2P59282 170 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 GNB1P62873 340 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 PITPNAQ00169 270 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 KIAA0141Q14154 515 aaPredicted RBP7.56□□□□□ -1.2
CIITA-207ENST00000571545 GLDNQ6ZMI3 551 aaPredicted RBP7.56□□□□□ -1.2
CIITA-207ENST00000571545 Q6ZS49 121 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 RITA1Q96K30 269 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 HARBI1Q96MB7 349 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 ELOVL1Q9BW60 279 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 PARP12Q9H0J9 701 aaKnown RBP7.56□□□□□ -1.2
CIITA-207ENST00000571545 SCOCQ9UIL1 159 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 LSM4Q9Y4Z0 139 aaKnown RBP7.56□□□□□ -1.2
CIITA-207ENST00000571545 SMAD5-AS1Q9Y6J3 95 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 A3GALT2U3KPV4 340 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 SORL1Q92673 2214 aa7.56□□□□□ -1.2
CIITA-207ENST00000571545 TRBV6-7A0A0A0MS04 114 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 C13orf42A0A1B0GVH6 325 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 MFNGO00587 321 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 SLC25A17O43808 307 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 SLC22A5O76082 557 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 CNIH1O95406 144 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 IGKV1-16P04430 117 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 HSPB1P04792 205 aaKnown RBP7.55□□□□□ -1.2
CIITA-207ENST00000571545 AADACP22760 399 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 ARFRP1Q13795 201 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 FXYD3Q14802 87 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 VMA21Q3ZAQ7 101 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
CIITA-207ENST00000571545 C11orf87Q6NUJ2 197 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 C5orf24Q7Z6I8 188 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 TPRA1Q86W33 373 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 ZNF383Q8NA42 475 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 DRAXINQ8NBI3 349 aaPredicted RBP7.55□□□□□ -1.2
CIITA-207ENST00000571545 LFNGQ8NES3 379 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 GRPEL2Q8TAA5 225 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 DCUN1D4Q92564 292 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 OR5B12Q96R08 314 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 OR4C12Q96R67 309 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 PRR25Q96S07 402 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 ZFAND3Q9H8U3 227 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 FBXO7Q9Y3I1 522 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 U3KQK5 164 aa7.55□□□□□ -1.2
CIITA-207ENST00000571545 IGKV1-6A0A0C4DH72 117 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 RAB27BO00194 218 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 SHOXO15266 292 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 SOX15O60248 233 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 BRI3O95415 125 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 TRGV3P03979 118 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 GNB3P16520 340 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 CD36P16671 472 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 FGF9P31371 208 aaPredicted RBP7.54□□□□□ -1.2
CIITA-207ENST00000571545 SCAND1P57086 179 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 FAM209BQ5JX69 171 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 ACSM6Q6P461 480 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 POC5Q8NA72 575 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 OSR1Q8TAX0 266 aaPredicted RBP7.54□□□□□ -1.2
CIITA-207ENST00000571545 CYYR1Q96J86 154 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 CLCC1Q96S66 551 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 YTHDF1Q9BYJ9 559 aaKnown RBP7.54□□□□□ -1.2
CIITA-207ENST00000571545 ATG5Q9H1Y0 275 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 DCSTAMPQ9H295 470 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 RANGRFQ9HD47 186 aaPredicted RBP7.54□□□□□ -1.2
CIITA-207ENST00000571545 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
CIITA-207ENST00000571545 STUB1Q9UNE7 303 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 236.1 ms