RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 HSMCR30P0CW71 290 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 SYNJ2BPP57105 145 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 RPS25P62851 125 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 PLA2G7Q13093 441 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 PLAC9Q5JTB6 97 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 SGPP2Q8IWX5 399 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR6M1Q8NGM8 313 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 RNF5Q99942 180 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 TM2D3Q9BRN9 247 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 URM1Q9BTM9 101 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 PECRQ9BY49 303 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 RIMS4Q9H426 269 aaPredicted RBP6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 C12orf4Q9NQ89 552 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 C8orf4Q9NR00 106 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 SLC35D1Q9NTN3 355 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 COA4Q9NYJ1 87 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 LSM2Q9Y333 95 aaKnown RBP6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 RYR2Q92736 4967 aa6.58□□□□□ -1.36
CTDNEP1-203ENST00000570385 TRBV6-6A0A0A6YYG2 114 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 IZUMO1RA6ND01 250 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 FOXI3A8MTJ6 420 aaPredicted RBP6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 TRDCB7Z8K6 153 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 ITGB1BP1O14713 200 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 BET1O15155 118 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 RBMXL2O75526 392 aaKnown RBP6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 UCHL1P09936 223 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 ZP3P21754 424 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 DYRK1AQ13627 763 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 KLF5Q13887 457 aaPredicted RBP6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 RAB11BQ15907 218 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 C2orf76Q3KRA6 126 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 IGSF11Q5DX21 431 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 IL34Q6ZMJ4 242 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 TMEM91Q6ZNR0 172 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 PDPNQ86YL7 162 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 FAM89BQ8N5H3 189 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 BVESQ8NE79 360 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR9G4Q8NGQ1 327 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 MAFIPQ8WZ33 124 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 UFD1Q92890 307 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 PTX4Q96A99 478 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 ISOC1Q96CN7 298 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 C5orf30Q96GV9 206 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR2D2Q9H210 308 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 EDA2RQ9HAV5 297 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 RETNQ9HD89 108 aa6.57□□□□□ -1.36
CTDNEP1-203ENST00000570385 A0A075B6Q4 140 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 A0A0G2JLM5 398 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 MSGN1A6NI15 193 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 SRRM4A7MD48 611 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 ANKRD65E5RJM6 399 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 J3QRK9 145 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 SLC17A2O00624 439 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 SHOXO15266 292 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 FABP7O15540 132 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 SPDEFO95238 335 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 PRH1P02810 166 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 CRYGBP07316 175 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 GSTT2P0CG29 244 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 GSTT2BP0CG30 244 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 CD37P11049 281 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 HAGHQ16775 308 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 MOGAT2Q3SYC2 334 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 HES5Q5TA89 166 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 OGFRL1Q5TC84 451 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 IDO2Q6ZQW0 420 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 FAM3DQ96BQ1 224 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 HARBI1Q96MB7 349 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 PHB2Q99623 299 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 TUBA4BQ9H853 241 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 SDHAF2Q9NX18 166 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 PEF1Q9UBV8 284 aaKnown RBP6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 ZNF230Q9UIE0 474 aaPredicted RBP6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 HSF4Q9ULV5 492 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 KCNK7Q9Y2U2 307 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 SELENOKQ9Y6D0 94 aa6.56□□□□□ -1.36
CTDNEP1-203ENST00000570385 DNAH1Q9P2D7 4330 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 TMEM272A0A1B0GTI8 110 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 H0Y980 276 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 DENRO43583 198 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 CSN3P07498 182 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 GNB3P16520 340 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 CALRP27797 417 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 MAP2K4P45985 399 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 LGALS7P47929 136 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 MRPS15P82914 257 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 TAGLNQ01995 201 aaKnown RBP6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 IRF3Q14653 427 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 TNXAQ16473 311 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 MRGPRG-AS1Q2M3A8 158 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 RPEL1Q2QD12 228 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 RNLSQ5VYX0 342 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 OR56B1Q8NGI3 324 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 RAB3CQ96E17 227 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 FAM110AQ9BQ89 295 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 SPATA25Q9BR10 227 aa6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 TINAGL1Q9GZM7 467 aaPredicted RBP6.55□□□□□ -1.36
CTDNEP1-203ENST00000570385 CCDC90BQ9GZT6 254 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms