RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ADTRPQ96IZ2 230 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 TP53RKQ96S44 253 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 MINOS1-NBL1R4GNA1 71 aa12.5□□□□□ -0.41
HERPUD1-219ENST00000570273 LINC00473A8K010 186 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 VGLL3A8MV65 326 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 SNRPGP15A8MWD9 76 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 LY6LH3BQJ8 138 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 TXNL1O43396 289 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 SAA4P35542 130 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 LINC00205P59089 165 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 SP6Q3SY56 376 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 MIDNQ504T8 468 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 RUSC1-AS1Q66K80 236 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 GALNT14Q96FL9 552 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 PRR13Q9NZ81 148 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 PRELID3BQ9Y3B1 194 aa12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 FLNAP21333 2647 aaKnown RBP12.49□□□□□ -0.41
HERPUD1-219ENST00000570273 SSNA1O43805 119 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 CD5LO43866 347 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 B3GALNT1O75752 331 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 DUS4LO95620 317 aaKnown RBP12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 CT45A6P0DMU7 189 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 CT45A5P0DMU8 189 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 CT45A7P0DMV0 189 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 EPHA1P21709 976 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 KIR2DS2P43631 304 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 KRTAP1-1Q07627 177 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 ZNF816Q0VGE8 651 aaPredicted RBP12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 LDLRAD2Q5SZI1 272 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 ZNF383Q8NA42 475 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 COQ8AQ8NI60 647 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 C18orf12Q96KH6 178 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 NABP2Q9BQ15 211 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 HILPDAQ9Y5L2 63 aa12.48□□□□□ -0.41
HERPUD1-219ENST00000570273 FCGR3BO75015 233 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 APOA2P02652 100 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 SERPINE2P07093 398 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 TMEM187Q14656 261 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 ANKRD55Q3KP44 614 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 KLF17Q5JT82 389 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 LIN54Q6MZP7 749 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 BRD3OSQ6XYD6 125 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 SPAG16Q8N0X2 631 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 C12orf45Q8N5I9 185 aaPredicted RBP12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 UXS1Q8NBZ7 420 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 PHB2Q99623 299 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 TMEM222Q9H0R3 208 aa12.47□□□□□ -0.41
HERPUD1-219ENST00000570273 IGHV1-3A0A0C4DH29 117 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 A8MV72 311 aaPredicted RBP12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 OOSP1A8MZH6 123 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 H0YJW9 148 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 UCP1P25874 307 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 SRPXP78539 464 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 SSX2Q16385 188 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 RTL8BQ17RB0 113 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 CCDC144NLQ6NUI1 221 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 LIAT1Q6ZQX7 453 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 MOB3BQ86TA1 216 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 LGI3Q8N145 548 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 TCTEX1D1Q8N7M0 179 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 GLYATL2Q8WU03 294 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 MITD1Q8WV92 249 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 C17orf50Q8WW18 174 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 DDB2Q92466 427 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 SLC35D1Q9NTN3 355 aa12.46□□□□□ -0.41
HERPUD1-219ENST00000570273 A0A1W2PPI3 338 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 RAMP3O60896 148 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 LPAR6P43657 344 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 TAGLNQ01995 201 aaKnown RBP12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 OR8H3Q8N146 312 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 OR4S2Q8NH73 311 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 NANPQ8TBE9 248 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 CD300LFQ8TDQ1 290 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 MED28Q9H204 178 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 YAE1D1Q9NRH1 226 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 ABCA1O95477 2261 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 F8P00451 2351 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 IGHV3-72A0A0B4J1Y9 119 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 A0A0B4J2A0 478 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 H7C2Y5 167 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 TIMM23O14925 209 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 RBFOX2O43251 390 aaKnown RBP eCLIP12.45□□□□□ -0.424e-14■■■■■ 35.7
HERPUD1-219ENST00000570273 S1PR2O95136 353 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 FSHBP01225 129 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 PAX6P26367 422 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 ARHGDIBP52566 201 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 ZNF695Q8IW36 515 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 TEX29Q8N6K0 151 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 OR5AN1Q8NGI8 311 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 LHFPL5Q8TAF8 219 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 MALSU1Q96EH3 234 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 FAM212BQ9NTI7 297 aaPredicted RBP12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 SHPKQ9UHJ6 478 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 WASHC3Q9Y3C0 194 aa12.45□□□□□ -0.42
HERPUD1-219ENST00000570273 ZANQ9Y493 2812 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms