RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ELK1P19419 428 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 DTYMKP23919 212 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 RORCP51449 518 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 RAB25P57735 213 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 TAS2R20P59543 309 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 PITPNAQ00169 270 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 SPCS2Q15005 226 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 ARL6IP1Q15041 203 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 CTF1Q16619 201 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 PNLIPRP3Q17RR3 467 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 LY6G6FQ5SQ64 297 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 LIN54Q6MZP7 749 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 ANKRD13BQ86YJ7 626 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 CROCCP3Q8IVE0 287 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 H1FOOQ8IZA3 346 aaPredicted RBP7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 BEST4Q8NFU0 473 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 SECTM1Q8WVN6 248 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 OR5B12Q96R08 314 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 CABLES2Q9BTV7 478 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 TPSG1Q9NRR2 321 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 TAS2R8Q9NYW2 309 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 METTL1Q9UBP6 276 aaKnown RBP7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 ANXA10Q9UJ72 324 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 TRRAPQ9Y4A5 3859 aa7.11□□□□□ -1.27
GTF3C1-210ENST00000569394 SMIM31A0A1B0GVY4 71 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 CCDC160A6NGH7 325 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 OR5H14A6NHG9 310 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 AP4M1O00189 453 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 ATP6V0E1O15342 81 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 XRCC3O43542 346 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 SLC25A17O43808 307 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 FCGR3BO75015 233 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 GABARAPO95166 117 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 VDAC1P21796 283 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 AADACP22760 399 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 FCGR2CP31995 323 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 MC5RP33032 325 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 ALDH3B2P48448 385 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 LUMP51884 338 aaPredicted RBP7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 SLC35B1P78383 322 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 CD83Q01151 205 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 DEFA6Q01524 100 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 C5orf64Q2M2E5 130 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 DEFB136Q30KP8 78 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 CNIH2Q6PI25 160 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 C8orf86Q6ZUL3 223 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 NDUFA11Q86Y39 141 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 FAM71E2Q8N5Q1 922 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 KLHL30-AS1Q8NEE0 82 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 WIPF2Q8TF74 440 aaPredicted RBP7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 CHPT1Q8WUD6 406 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 SNAPC3Q92966 411 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 FLYWCH2Q96CP2 140 aaKnown RBP7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 CCL28Q9NRJ3 127 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 GAB2Q9UQC2 676 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 FBXO7Q9Y3I1 522 aa7.1□□□□□ -1.27
GTF3C1-210ENST00000569394 CMYA5Q8N3K9 4069 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 IGHV7-81A0A0B4J1V7 117 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 LINC00473A8K010 186 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 G3V4G9 280 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 ITGB1BP1O14713 200 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 RRHO14718 337 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 SHOXO15266 292 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 RGS5O15539 181 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 KCNAB3O43448 404 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 CRYZL1O95825 349 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 CA2P00918 260 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OPN1MWP04001 364 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OPN1MW2P0DN77 364 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OPN1MW3P0DN78 364 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 HLA-DMAP28067 261 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 RFX2P48378 723 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 SCAND1P57086 179 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 RPL30P62888 115 aaKnown RBP7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 PSG5Q15238 335 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 MZT2AQ6P582 158 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 IDO2Q6ZQW0 420 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 TMEM17Q86X19 198 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 HOGA1Q86XE5 327 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OR4F17Q8NGA8 305 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OR8H1Q8NGG4 311 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OR5AN1Q8NGI8 311 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 GRPEL2Q8TAA5 225 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 MS4A10Q96PG2 267 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OR4F4Q96R69 305 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OR51J1Q9H342 316 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 NECAP2Q9NVZ3 263 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 EHFQ9NZC4 300 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 EXTL2Q9UBQ6 330 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 OR2W1Q9Y3N9 320 aa7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 TSSC4Q9Y5U2 329 aaPredicted RBP7.09□□□□□ -1.27
GTF3C1-210ENST00000569394 WNK1Q9H4A3 2382 aa7.09□□□□□ -1.28
GTF3C1-210ENST00000569394 PLXNB1O43157 2135 aa7.09□□□□□ -1.28
GTF3C1-210ENST00000569394 ELOA3CA0A087WX78 387 aaPredicted RBP7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 A0A1W2PN81 502 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 CNIH1O95406 144 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 HLA-DQB1P01920 261 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 CTXN2P0C2S0 81 aa7.08□□□□□ -1.28
GTF3C1-210ENST00000569394 OR5H8P0DN80 308 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms