RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DYNAPQ8N1N2 210 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 TMEM86BQ8N661 226 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 POC5Q8NA72 575 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 AJUBAQ96IF1 538 aa12.91□□□□□ -0.34
USB1-215ENST00000569252 ZNF48Q96MX3 618 aaPredicted RBP12.91□□□□□ -0.34
USB1-215ENST00000569252 HSD17B10Q99714 261 aaKnown RBP12.91□□□□□ -0.34
USB1-215ENST00000569252 C14orf166Q9Y224 244 aaKnown RBP12.91□□□□□ -0.34
USB1-215ENST00000569252 UPK1BO75841 260 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 RRASP10301 218 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 DEFA1P59665 94 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 DEFA3P59666 94 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 CATR1Q13166 79 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 RTL8BQ17RB0 113 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 ZNF66Q6ZN08 573 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 THNSL2Q86YJ6 484 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 DRAXINQ8NBI3 349 aaPredicted RBP12.9□□□□□ -0.34
USB1-215ENST00000569252 OR2T10Q8NGZ9 312 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 ZNF486Q96H40 463 aaPredicted RBP12.9□□□□□ -0.34
USB1-215ENST00000569252 NABP2Q9BQ15 211 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 MRPL20Q9BYC9 149 aaKnown RBP12.9□□□□□ -0.34
USB1-215ENST00000569252 RAB18Q9NP72 206 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 SLC2A8Q9NY64 477 aa12.9□□□□□ -0.34
USB1-215ENST00000569252 IGHV3-72A0A0B4J1Y9 119 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 A0A1W2PPI3 338 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 TNFSF12O43508 249 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 IGHV4-59P01825 116 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 ZNF735P0CB33 412 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 CT45A6P0DMU7 189 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 CT45A5P0DMU8 189 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 CT45A7P0DMV0 189 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 GNRHRP30968 328 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 SURF2Q15527 256 aaPredicted RBP12.89□□□□□ -0.35
USB1-215ENST00000569252 AADACL3Q5VUY0 350 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 C11orf88Q6PI97 169 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 ZNF818PQ6ZRF7 136 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 LHFPL1Q86WI0 220 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 CCDC71LQ8N9Z2 235 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 BVESQ8NE79 360 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 TCTEX1D2Q8WW35 142 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 SLC25A21Q9BQT8 299 aaPredicted RBP12.89□□□□□ -0.35
USB1-215ENST00000569252 ZNF251Q9BRH9 671 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 RSRP1Q9BUV0 290 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 COPZ2Q9P299 210 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 PKD1L1Q8TDX9 2849 aa12.89□□□□□ -0.35
USB1-215ENST00000569252 TRRAPQ9Y4A5 3859 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 TRIM77I1YAP6 450 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 MOSP00540 346 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 IGKV1D-33P01593 117 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 IGKV1-33P01594 117 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 CRYBA1P05813 215 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 SNRNP70P08621 437 aaKnown RBP12.88□□□□□ -0.35
USB1-215ENST00000569252 TMEM11P17152 192 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 CD24P25063 80 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 HILS1P60008 231 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 HNF4GQ14541 408 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 LY6EQ16553 131 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 PHLDA2Q53GA4 152 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 KCTD9Q7L273 389 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 MARCH1Q8TCQ1 289 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 FXYD6Q9H0Q3 95 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 SLC35D1Q9NTN3 355 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 C1RLQ9NZP8 487 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 WASHC3Q9Y3C0 194 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 TGP01266 2768 aa12.88□□□□□ -0.35
USB1-215ENST00000569252 LYRM1O43325 122 aa12.87□□□□□ -0.35
USB1-215ENST00000569252 DUTP33316 252 aaKnown RBP12.87□□□□□ -0.35
USB1-215ENST00000569252 KIR2DS2P43631 304 aa12.87□□□□□ -0.35
USB1-215ENST00000569252 SLC9A3R2Q15599 337 aa12.87□□□□□ -0.35
USB1-215ENST00000569252 GLDNQ6ZMI3 551 aaPredicted RBP12.87□□□□□ -0.35
USB1-215ENST00000569252 PDPNQ86YL7 162 aa12.87□□□□□ -0.35
USB1-215ENST00000569252 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
USB1-215ENST00000569252 FLYWCH2Q96CP2 140 aaKnown RBP12.87□□□□□ -0.35
USB1-215ENST00000569252 VPREB3Q9UKI3 123 aa12.87□□□□□ -0.35
USB1-215ENST00000569252 FAM240BA0A1B0GVZ2 78 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 DNAJC9-AS1A6NH13 148 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 FAM90A9PA6NNJ1 464 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 NCBP2LA6PVI3 153 aaKnown RBP12.86□□□□□ -0.35
USB1-215ENST00000569252 CLDN34H7C241 214 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 PGLYRP1O75594 196 aaPredicted RBP12.86□□□□□ -0.35
USB1-215ENST00000569252 CTSDP07339 412 aaPredicted RBP12.86□□□□□ -0.35
USB1-215ENST00000569252 PIGPP57054 158 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 RPS16P62249 146 aaKnown RBP12.86□□□□□ -0.35
USB1-215ENST00000569252 HABP2Q14520 560 aaPredicted RBP12.86□□□□□ -0.35
USB1-215ENST00000569252 RBMS2Q15434 407 aaKnown RBP12.86□□□□□ -0.35
USB1-215ENST00000569252 C16orf82Q7Z2V1 217 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 ZNF383Q8NA42 475 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 OR5AN1Q8NGI8 311 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 OR4C13Q8NGP0 309 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 OR13C8Q8NGS7 320 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 CFHR4Q92496 578 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 DUX5Q96PT3 197 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 RNF5Q99942 180 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 AIFM2Q9BRQ8 373 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 TCF19Q9Y242 345 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 KCNIP3Q9Y2W7 256 aa12.86□□□□□ -0.35
USB1-215ENST00000569252 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
USB1-215ENST00000569252 H0YJW9 148 aa12.85□□□□□ -0.35
USB1-215ENST00000569252 FCGR3BO75015 233 aa12.85□□□□□ -0.35
USB1-215ENST00000569252 PROP1O75360 226 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms