RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 H0YJW9 148 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 MOSP00540 346 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 IL7P13232 177 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 TMEM11P17152 192 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 DUTP33316 252 aaKnown RBP13.4□□□□□ -0.26
COMMD4-224ENST00000568877 FAUP35544 74 aaKnown RBP13.4□□□□□ -0.26
COMMD4-224ENST00000568877 PPP5CP53041 499 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 UCP3P55916 312 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 EIF4EBP1Q13541 118 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-224ENST00000568877 HNF4GQ14541 408 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 ZNF846Q147U1 533 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 SCGB2B2Q4G0G5 96 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 LPCAT3Q6P1A2 487 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 ZNF818PQ6ZRF7 136 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 DEDD2Q8WXF8 326 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 RBM14Q96PK6 669 aaKnown RBP13.4□□□□□ -0.26
COMMD4-224ENST00000568877 CCDC32Q9BV29 185 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 HRASLSQ9HDD0 168 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 RAB18Q9NP72 206 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 MCUBQ9NWR8 336 aa13.4□□□□□ -0.26
COMMD4-224ENST00000568877 LINC00473A8K010 186 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 CHST1O43916 411 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 OR2F2O95006 317 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 APOA2P02652 100 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 CD40LGP29965 261 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 TAGLNQ01995 201 aaKnown RBP13.39□□□□□ -0.27
COMMD4-224ENST00000568877 ZNF66Q6ZN08 573 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 C16orf82Q7Z2V1 217 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 Q8N6K4 173 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 BVESQ8NE79 360 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 RBMXL1Q96E39 390 aaKnown RBP13.39□□□□□ -0.27
COMMD4-224ENST00000568877 HSD17B10Q99714 261 aaKnown RBP13.39□□□□□ -0.27
COMMD4-224ENST00000568877 PRRT1Q99946 306 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 SLC25A33Q9BSK2 321 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 SLC35D1Q9NTN3 355 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 SLC2A8Q9NY64 477 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 WASHC3Q9Y3C0 194 aa13.39□□□□□ -0.27
COMMD4-224ENST00000568877 H7C2Y5 167 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 GPR31O00270 319 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 TNFSF12O43508 249 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 RPL15P61313 204 aaKnown RBP13.38□□□□□ -0.27
COMMD4-224ENST00000568877 RPL30P62888 115 aaKnown RBP13.38□□□□□ -0.27
COMMD4-224ENST00000568877 PDPNQ86YL7 162 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 CMTM1Q8IZ96 169 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 SLC38A6Q8IZM9 456 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 DDB2Q92466 427 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 GPHA2Q96T91 129 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 RSRP1Q9BUV0 290 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 SCP2D1Q9UJQ7 156 aa13.38□□□□□ -0.27
COMMD4-224ENST00000568877 CRYBA1P05813 215 aa13.37□□□□□ -0.27
COMMD4-224ENST00000568877 RRASP10301 218 aa13.37□□□□□ -0.27
COMMD4-224ENST00000568877 PGAM2P15259 253 aa13.37□□□□□ -0.27
COMMD4-224ENST00000568877 ECI1P42126 302 aa13.37□□□□□ -0.27
COMMD4-224ENST00000568877 DHRS7BQ6IAN0 325 aaPredicted RBP13.37□□□□□ -0.27
COMMD4-224ENST00000568877 IDO2Q6ZQW0 420 aa13.37□□□□□ -0.27
COMMD4-224ENST00000568877 KCTD9Q7L273 389 aa13.37□□□□□ -0.27
COMMD4-224ENST00000568877 MRGPRFQ96AM1 343 aa13.37□□□□□ -0.27
COMMD4-224ENST00000568877 LINC00854A0A1B0GVQ3 168 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 PGLYRP1O75594 196 aaPredicted RBP13.36□□□□□ -0.27
COMMD4-224ENST00000568877 IGKV1-16P04430 117 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 RTL8BQ17RB0 113 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 PHLDA2Q53GA4 152 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 OR8H1Q8NGG4 311 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 OR13C8Q8NGS7 320 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 ZFAND1Q8TCF1 268 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 MARCH1Q8TCQ1 289 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 TCTEX1D2Q8WW35 142 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 RITA1Q96K30 269 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 RNF5Q99942 180 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 PLSCR3Q9NRY6 295 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 C1RLQ9NZP8 487 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 MOB4Q9Y3A3 225 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 PRELID3BQ9Y3B1 194 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 JMJD1CQ15652 2540 aa13.36□□□□□ -0.27
COMMD4-224ENST00000568877 NAP1L6A6NFF2 107 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 NCBP2LA6PVI3 153 aaKnown RBP13.35□□□□□ -0.27
COMMD4-224ENST00000568877 M0QZK8 103 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 FCGR3BO75015 233 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 S100GP29377 79 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 F2RL1P55085 397 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 CATR1Q13166 79 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 CBX3Q13185 183 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 SURF2Q15527 256 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-224ENST00000568877 KRTAP24-1Q3LI83 254 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-224ENST00000568877 OR4C13Q8NGP0 309 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 FLYWCH2Q96CP2 140 aaKnown RBP13.35□□□□□ -0.27
COMMD4-224ENST00000568877 ZNF486Q96H40 463 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-224ENST00000568877 NPFFR1Q9GZQ6 430 aa13.35□□□□□ -0.27
COMMD4-224ENST00000568877 CENPXA8MT69 81 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 RNF212BA8MTL3 300 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 FGF16O43320 207 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 RLN1P04808 185 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 PI3P19957 117 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 RPS16P62249 146 aaKnown RBP13.34□□□□□ -0.27
COMMD4-224ENST00000568877 MMDQ15546 238 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 ABCA11PQ4W5N1 156 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 OR2B11Q5JQS5 317 aa13.34□□□□□ -0.27
COMMD4-224ENST00000568877 OR51H1Q8NH63 302 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms