RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 PDPNQ86YL7 162 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 LAX1Q8IWV1 398 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 ZNF645Q8N7E2 425 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 NOL4LQ96MY1 436 aaPredicted RBP7.73□□□□□ -1.17
CLK3-220ENST00000567992 SLIRPQ9GZT3 109 aaKnown RBP7.73□□□□□ -1.17
CLK3-220ENST00000567992 LINC00527Q9UJ94 153 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 ADAM30Q9UKF2 790 aa7.73□□□□□ -1.17
CLK3-220ENST00000567992 LINC00473A8K010 186 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 J3QRK9 145 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 CTDSP2O14595 271 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 RBBP9O75884 186 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 HLA-DRB1P01911 266 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 OR5H8P0DN80 308 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 AADACP22760 399 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 FCGR2CP31995 323 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 DUTP33316 252 aaKnown RBP7.72□□□□□ -1.17
CLK3-220ENST00000567992 PRSS3P35030 304 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 LUMP51884 338 aaPredicted RBP7.72□□□□□ -1.17
CLK3-220ENST00000567992 ARPC4P59998 168 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 NDPQ00604 133 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 CD83Q01151 205 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 CFHR3Q02985 330 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 ZNF846Q147U1 533 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 C5orf64Q2M2E5 130 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 OVCH2Q7RTZ1 564 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 SNX29P2Q8IUI4 249 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 LYSMD2Q8IV50 215 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 STPG2Q8N412 459 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 OR5AU1Q8NGC0 362 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 OR5AP2Q8NGF4 316 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 S100ZQ8WXG8 99 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 CITED2Q99967 270 aaPredicted RBP7.72□□□□□ -1.17
CLK3-220ENST00000567992 RASL11BQ9BPW5 248 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 WDR12Q9GZL7 423 aaKnown RBP7.72□□□□□ -1.17
CLK3-220ENST00000567992 SCPEP1Q9HB40 452 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 IFT46Q9NQC8 304 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 NECAP2Q9NVZ3 263 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 EXTL2Q9UBQ6 330 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 ZNF580Q9UK33 172 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 RBMX2Q9Y388 322 aaKnown RBP7.72□□□□□ -1.17
CLK3-220ENST00000567992 NOTCH1P46531 2555 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 PLXNB1O43157 2135 aa7.72□□□□□ -1.17
CLK3-220ENST00000567992 IGHV7-81A0A0B4J1V7 117 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 FAM25AB3EWG3 89 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 FAM25CB3EWG5 89 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 FAM25GB3EWG6 89 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 H7C2Y5 167 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 M0QZ24 198 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 RRHO14718 337 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 KCNAB3O43448 404 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 PEX14O75381 377 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 PPYP01298 95 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 IGLV2-23P01705 113 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 APOA2P02652 100 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 IGF1P05019 195 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 SOX6P35712 828 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 THBS3P49746 956 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 BRWD1-AS2P59051 145 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.18
CLK3-220ENST00000567992 SSBP2P81877 361 aaPredicted RBP7.71□□□□□ -1.18
CLK3-220ENST00000567992 CDK10Q15131 360 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 PSG5Q15238 335 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 TMEM177Q53S58 311 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 ZNF329Q86UD4 541 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 ABHD1Q96SE0 405 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 RNF5Q99942 180 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 NXF2Q9GZY0 626 aaKnown RBP7.71□□□□□ -1.18
CLK3-220ENST00000567992 FBXL15Q9H469 300 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 AKIP1Q9NQ31 210 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 TPSG1Q9NRR2 321 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 SLC35D1Q9NTN3 355 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 MRPS7Q9Y2R9 242 aaKnown RBP7.71□□□□□ -1.18
CLK3-220ENST00000567992 RBM7Q9Y580 266 aaKnown RBP7.71□□□□□ -1.18
CLK3-220ENST00000567992 A3GALT2U3KPV4 340 aa7.71□□□□□ -1.18
CLK3-220ENST00000567992 PSMB11A5LHX3 300 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 SRRM4A7MD48 611 aaKnown RBP7.7□□□□□ -1.18
CLK3-220ENST00000567992 AP4M1O00189 453 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 SULT1C2O00338 296 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 FCN1O00602 326 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 TPPPO94811 219 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 SPDEFO95238 335 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 PMP2P02689 132 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 CRYGBP07316 175 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 RFX2P48378 723 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 TAS2R46P59540 309 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 DYRK1AQ13627 763 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 MSMO1Q15800 293 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 MRGPRG-AS1Q2M3A8 158 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 C2orf68Q2NKX9 166 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 C19orf54Q5BKX5 351 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 TREML4Q6UXN2 200 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 CENPVQ7Z7K6 275 aaPredicted RBP7.7□□□□□ -1.18
CLK3-220ENST00000567992 NDUFA11Q86Y39 141 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 FOXRED2Q8IWF2 684 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 BVESQ8NE79 360 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 CHPT1Q8WUD6 406 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 GIMAP1Q8WWP7 306 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 ADTRPQ96IZ2 230 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 GPHA2Q96T91 129 aa7.7□□□□□ -1.18
CLK3-220ENST00000567992 FXYD6Q9H0Q3 95 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms