RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 CNIH1O95406 144 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 RAB36O95755 333 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CLIC3O95833 236 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TSPAN13O95857 204 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 IGF2P01344 180 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 C1QCP02747 245 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CSN2P05814 226 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 HTR1AP08908 422 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 ADRA2AP08913 450 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CST2P09228 141 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 C8orf88P0DMB2 117 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SULT1A3P0DMM9 295 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SULT1A4P0DMN0 295 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 ZNF35P13682 527 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 ZNF250P15622 560 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 MYL12AP19105 171 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 RPS3P23396 243 aaKnown RBP eCLIP2.27□□□□□ -2.052e-6■■□□□ 11.4
HERPUD1-212ENST00000567944 PSMA1P25786 263 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 PSMB5P28074 263 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 GLP1RP43220 463 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CRYBB2P43320 205 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 EFNB2P52799 333 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CTBP2P56545 445 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TAS2R43P59537 309 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 STXBP1P61764 594 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CDK6Q00534 326 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CAV1Q03135 178 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 REG3AQ06141 175 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 OR5I1Q13606 314 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 EDDM3AQ14507 147 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SNRNP35Q16560 246 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 IAH1Q2TAA2 248 aaPredicted RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 PLPPR5Q32ZL2 321 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SPIN4Q56A73 249 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TMEM128Q5BJH2 165 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TSPO2Q5TGU0 170 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 OR52W1Q6IF63 320 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 FAHD1Q6P587 224 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CD200R1LQ6Q8B3 271 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SCIMPQ6UWF3 145 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 DRAM2Q6UX65 266 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 GTF2H5Q6ZYL4 71 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 HIST2H3AQ71DI3 136 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 DEFB128Q7Z7B8 93 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 S100A7AQ86SG5 101 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SLC35F2Q8IXU6 374 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TPRX1Q8N7U7 411 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 OR2G2Q8NGZ5 317 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SLC7A13Q8TCU3 470 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 NRGNQ92686 78 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 MALSU1Q96EH3 234 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 IMP4Q96G21 291 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 CPB2Q96IY4 423 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TSSK3Q96PN8 268 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TP53RKQ96S44 253 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 MAP1LC3CQ9BXW4 147 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 MS4A8Q9BY19 250 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SLC17A9Q9BYT1 436 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 MED28Q9H204 178 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 DSN1Q9H410 356 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 C1orf198Q9H425 327 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 RBKSQ9H477 322 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 RERGLQ9H628 205 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TMEM27Q9HBJ8 222 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 MED29Q9NX70 200 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SLC25A37Q9NYZ2 338 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 DHCR7Q9UBM7 475 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 NXT1Q9UKK6 140 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 TFR2Q9UP52 801 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SLC35A3Q9Y2D2 325 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 RPL36Q9Y3U8 105 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 LSM5Q9Y4Y9 91 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 ORC6Q9Y5N6 252 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SNX10Q9Y5X0 201 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 URB1O60287 2271 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 BAZ2BQ9UIF8 2168 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 NUP205Q92621 2012 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SPEGQ15772 3267 aa2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 SPTBN1Q01082 2364 aaKnown RBP2.27□□□□□ -2.05
HERPUD1-212ENST00000567944 DOCK5Q9H7D0 1870 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 DOPEY2Q9Y3R5 2298 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 ATG2BQ96BY7 2078 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 EXOC1LA0A1B0GW35 172 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 RBMY1BA6NDE4 496 aaKnown RBP2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 RBMY1EA6NEQ0 496 aaKnown RBP2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 LOC730098B7Z3J9 87 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 FTCDNL1E5RQL4 147 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 G3V3Q6 166 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 CORTO00230 105 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 HSD17B6O14756 317 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 NBR2O15453 112 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 AIREO43918 545 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 SLC19A2O60779 497 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 EDF1O60869 148 aaKnown RBP2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 ICOSLGO75144 302 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 ENTPD6O75354 484 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 ZNF324O75467 553 aaPredicted RBP2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 FOXH1O75593 365 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 TRAPPC6AO75865 159 aa2.26□□□□□ -2.05
HERPUD1-212ENST00000567944 OR2J3O76001 311 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms