RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 TRBV23-1A0A0A0MS06 115 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 A0A1B0GW55 424 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 F5H0A9 414 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-221ENST00000567935 GPR37O15354 613 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 RBFOX2O43251 390 aaKnown RBP eCLIP12.05□□□□□ -0.48
COMMD4-221ENST00000567935 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 CFDP00746 253 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-221ENST00000567935 DUX4L2P0CJ85 424 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 DUX4L3P0CJ86 424 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 DUX4L4P0CJ87 422 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 DUX4L5P0CJ88 424 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 DUX4L6P0CJ89 424 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 DUX4L7P0CJ90 424 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 TPT1P13693 172 aaKnown RBP12.05□□□□□ -0.48
COMMD4-221ENST00000567935 NDUFB7P17568 137 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 RPL12P30050 165 aaKnown RBP12.05□□□□□ -0.48
COMMD4-221ENST00000567935 DTX2Q86UW9 622 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 OR8H3Q8N146 312 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 ZNF471Q9BX82 626 aaPredicted RBP12.05□□□□□ -0.48
COMMD4-221ENST00000567935 ZC4H2Q9NQZ6 224 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 SDHAF2Q9NX18 166 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 COA4Q9NYJ1 87 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 DUX4Q9UBX2 424 aa12.05□□□□□ -0.48
COMMD4-221ENST00000567935 IGHV3-43A0A0B4J1X8 118 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 FAM90A26D6RGX4 464 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 GPR137BO60478 399 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 PITX3O75364 302 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 GAPDHP04406 335 aaKnown RBP12.04□□□□□ -0.48
COMMD4-221ENST00000567935 IGHV3-43DP0DP04 118 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 HKR1P10072 659 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 DAOP14920 347 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 ZNF16P17020 682 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-221ENST00000567935 ARHGDIBP52566 201 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 AKR1C2P52895 323 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 RPL31P62899 125 aaKnown RBP12.04□□□□□ -0.48
COMMD4-221ENST00000567935 ID3Q02535 119 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 ZNF585BQ52M93 769 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 C11orf71Q6IPW1 123 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 FOXRED2Q8IWF2 684 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 TCTEX1D2Q8WW35 142 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 ADTRPQ96IZ2 230 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 ABHD14AQ9BUJ0 271 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 CACFD1Q9UGQ2 172 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 RPUSD1Q9UJJ7 312 aaKnown RBP12.04□□□□□ -0.48
COMMD4-221ENST00000567935 RNF150Q9ULK6 438 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 MMP24Q9Y5R2 645 aa12.04□□□□□ -0.48
COMMD4-221ENST00000567935 LINC00862A6NCI5 91 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 A6NNC1 897 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 WRBO00258 174 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 CRLF1O75462 422 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 SPDEFO95238 335 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 F12P00748 615 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-221ENST00000567935 LPAR6P43657 344 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
COMMD4-221ENST00000567935 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
COMMD4-221ENST00000567935 HEPN1Q6WQI6 88 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 TCF23Q7RTU1 214 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 SPAG16Q8N0X2 631 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 LRRC20Q8TCA0 184 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 ZNF714Q96N38 554 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 RAB40CQ96S21 281 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 GPHA2Q96T91 129 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 SLC25A31Q9H0C2 315 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 IFI27L2Q9H2X8 130 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 PRELID3BQ9Y3B1 194 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 USF3Q68DE3 2245 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 ZANQ9Y493 2812 aa12.03□□□□□ -0.48
COMMD4-221ENST00000567935 ARID1AO14497 2285 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 RPS10-NUDT3A0A1W2PQS6 291 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 MSGN1A6NI15 193 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 RAB29O14966 203 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 JTBO76095 146 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 IGKV1-39P01597 117 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 IGKV1D-39P04432 117 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 VAMP2P63027 116 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 LTC4SQ16873 150 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 Q5PR19 223 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 BAP18Q8IXM2 172 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 SLC7A5P1Q8MH63 180 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 C8orf31Q8N9H6 132 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 ZNF439Q8NDP4 499 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 DMBX1Q8NFW5 382 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 C5orf30Q96GV9 206 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 TIMD4Q96H15 378 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 FAM210AQ96ND0 272 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 SLC25A32Q9H2D1 315 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 C11orf1Q9H5F2 150 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 MED9Q9NWA0 146 aa12.02□□□□□ -0.49
COMMD4-221ENST00000567935 RCL1Q9Y2P8 373 aaKnown RBP12.02□□□□□ -0.49
COMMD4-221ENST00000567935 A0A1W2PPH5 198 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 FAM90A9PA6NNJ1 464 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 DVL1O14640 695 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 TOR1AO14656 332 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 LY86O95711 162 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 IGKV1-5P01602 117 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 IGHV2-70P01814 119 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 DANCRP0C864 163 aa12.01□□□□□ -0.49
COMMD4-221ENST00000567935 DUTP33316 252 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms