RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 DHRS11Q6UWP2 260 aa16.71■□□□□ 0.27
SHCBP1-205ENST00000566016 KLHDC1Q8N7A1 406 aa16.71■□□□□ 0.27
SHCBP1-205ENST00000566016 WIPF2Q8TF74 440 aaPredicted RBP16.71■□□□□ 0.27
SHCBP1-205ENST00000566016 MTFP1Q9UDX5 166 aa16.71■□□□□ 0.27
SHCBP1-205ENST00000566016 CTDSPLO15194 276 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 NBR2O15453 112 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 IGHG2P01859 326 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 DUTP33316 252 aaKnown RBP16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 HRH1P35367 487 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 RFX2P48378 723 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 SSBP1Q04837 148 aaKnown RBP16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 ACTBL2Q562R1 376 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 OR52I2Q8NH67 350 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 FCAMRQ8WWV6 532 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 DDB2Q92466 427 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 RASL11BQ9BPW5 248 aa16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 RBMX2Q9Y388 322 aaKnown RBP16.7■□□□□ 0.26
SHCBP1-205ENST00000566016 WNK1Q9H4A3 2382 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 IGKV1-16P04430 117 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 RRASP10301 218 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 TBPP20226 339 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 HLA-DMAP28067 261 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 LINC00205P59089 165 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 KRTAP10-3P60369 221 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 TMEM95Q3KNT9 176 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 SMIM4Q8WVI0 70 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 SLC35D1Q9NTN3 355 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 KLK11Q9UBX7 282 aa16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 ZNF107Q9UII5 783 aaPredicted RBP16.69■□□□□ 0.26
SHCBP1-205ENST00000566016 SH2D7A6NKC9 451 aaPredicted RBP16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 KCNAB3O43448 404 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 PEX14O75381 377 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 SPDEFO95238 335 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 PMP2P02689 132 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 TNFSF8P32971 234 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 EIF4EBP1Q13541 118 aaPredicted RBP16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 RTL8BQ17RB0 113 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 C5orf64Q2M2E5 130 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 VAX1Q5SQQ9 334 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 ZBTB34Q8NCN2 500 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 BORCS5Q969J3 196 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 RBMXL1Q96E39 390 aaKnown RBP16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 RITA1Q96K30 269 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 HSD17B10Q99714 261 aaKnown RBP16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 KIAA1456Q9P272 454 aa16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 TET2Q6N021 2002 aaPredicted RBP16.68■□□□□ 0.26
SHCBP1-205ENST00000566016 DPPA5A6NC42 116 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 J3QRK9 145 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 HLA-DRB1P01911 266 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 VSIG10L2P0DP72 767 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 HERV-K104P61576 105 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 CBX3Q13185 183 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 IL18Q14116 193 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 C9orf152Q5JTZ5 239 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 SLC35E3Q7Z769 313 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 SECTM1Q8WVN6 248 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 MOB3AQ96BX8 217 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 FLYWCH2Q96CP2 140 aaKnown RBP16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 TSNAXQ99598 290 aaKnown RBP16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 SOSTQ9BQB4 213 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 PKD1L1Q8TDX9 2849 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 VWFP04275 2813 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 TNCP24821 2201 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 LINC00473A8K010 186 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 RRHO14718 337 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 CNTFRP26992 372 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 KCTD9Q7L273 389 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 OR6F1Q8NGZ6 308 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 ZNF580Q9UK33 172 aa16.67■□□□□ 0.26
SHCBP1-205ENST00000566016 S100A5P33763 92 aa16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 LGALS7P47929 136 aa16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 DGCR2P98153 550 aa16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 SRSF4Q08170 494 aaKnown RBP16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 TMEM177Q53S58 311 aa16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 ZNF66Q6ZN08 573 aa16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 FOXRED2Q8IWF2 684 aa16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 ZNF2Q9BSG1 426 aaPredicted RBP16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 SLC5A7Q9GZV3 580 aa16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 PRELID3BQ9Y3B1 194 aa16.66■□□□□ 0.26
SHCBP1-205ENST00000566016 MGAM2Q2M2H8 2515 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 FABP12A6NFH5 140 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 AP4M1O00189 453 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 GSTZ1O43708 216 aaPredicted RBP16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 FXYD4P59646 89 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 RNASE12Q5GAN4 147 aaKnown RBP16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 FOXB2Q5VYV0 432 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 ARRDC1Q8N5I2 433 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 CHPT1Q8WUD6 406 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 CCL28Q9NRJ3 127 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 TRRAPQ9Y4A5 3859 aa16.65■□□□□ 0.26
SHCBP1-205ENST00000566016 CD74P04233 296 aa16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 TAS2R19P59542 299 aa16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 RPS16P62249 146 aaKnown RBP16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 RNASE10Q5GAN6 216 aaKnown RBP16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 TMEM17Q86X19 198 aa16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 TMEM229BQ8NBD8 167 aa16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 BVESQ8NE79 360 aa16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 OSR1Q8TAX0 266 aaPredicted RBP16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 HSPB9Q9BQS6 159 aa16.64■□□□□ 0.25
SHCBP1-205ENST00000566016 CD3DP04234 171 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms