RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 FOXI3A8MTJ6 420 aaPredicted RBP6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 G3V318 75 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 RAB27BO00194 218 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 HSD17B6O14756 317 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 SOCS1O15524 211 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 IGHV3-7P01780 117 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 APOA1P02647 267 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 MT-ND4P03905 459 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 GSTP1P09211 210 aaKnown RBP6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 CGB3P0DN86 165 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 CGB7P0DN87 165 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 MRPS15P82914 257 aaKnown RBP6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 C17orf58Q2M2W7 97 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 UBE2NLQ5JXB2 153 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 UTF1Q5T230 341 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 C6orf183Q5T699 404 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 RSBN1Q5VWQ0 802 aaPredicted RBP6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 LCN12Q6JVE5 192 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 Q8N402 240 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 C15orf40Q8WUR7 153 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 LEAP2Q969E1 77 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 RAB3CQ96E17 227 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 ATG5Q9H1Y0 275 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 BATF3Q9NR55 127 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 RHBDL2Q9NX52 303 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 ETAA1Q9NY74 926 aa6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 RSL24D1Q9UHA3 163 aaKnown RBP6.88□□□□□ -1.31
VPS9D1-205ENST00000565452 A0A075B6Q4 140 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 MEIKINA0A087WXM9 373 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 CCDC160A6NGH7 325 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 H3BMQ9 156 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 XRCC3O43542 346 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 NDUFB8O95169 186 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 TGFBR1P36897 503 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 REG1BP48304 166 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 F2RL1P55085 397 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 Q3ZCU0 254 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 MOB1BQ7L9L4 216 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 C6orf201Q7Z4U5 140 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 MINDY2Q8NBR6 621 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 OR52M1Q8NGK5 317 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 LGALS14Q8TCE9 139 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 DYNC2LI1Q8TCX1 351 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 COQ2Q96H96 371 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 NICN1Q9BSH3 213 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 THAP7Q9BT49 309 aaPredicted RBP6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 FAAP24Q9BTP7 215 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 PECRQ9BY49 303 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 RBM38Q9H0Z9 239 aaKnown RBP6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 PLEKHA3Q9HB20 300 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 SLC2A8Q9NY64 477 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 IDI2-AS1Q9NZ38 188 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 KCNIP1Q9NZI2 227 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 CCDC59Q9P031 241 aaKnown RBP6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 KIF25Q9UIL4 384 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 ADAM30Q9UKF2 790 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 TRAPPC2LQ9UL33 140 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 A3GALT2U3KPV4 340 aa6.87□□□□□ -1.31
VPS9D1-205ENST00000565452 A0A0A6YYD4 124 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 UBE2QL1A1L167 161 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 SMIM30A4D0T7 59 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 NPIPB11E5RHQ5 1161 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 SPINT2O43291 252 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 NAPSAO96009 420 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 CD3GP09693 182 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 HIST1H1DP16402 221 aaKnown RBP6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 ZP3P21754 424 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 CD40LGP29965 261 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 GLP1RP43220 463 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 GNG10P50151 68 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 ATXN7L3Q14CW9 347 aaPredicted RBP6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 SPCS2Q15005 226 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 TATDN3Q17R31 274 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 CDNFQ49AH0 187 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 LY6G6FQ5SQ64 297 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 ZNF880Q6PDB4 577 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 SAMD12Q8N8I0 201 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 OR5H6Q8NGV6 325 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 PLPPR1Q8TBJ4 325 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 ARHGAP5-AS1Q96IT6 56 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 CMSS1Q9BQ75 279 aaKnown RBP6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 SULT4A1Q9BR01 284 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 NEURL2Q9BR09 285 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 KCNK15Q9H427 330 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 RANGRFQ9HD47 186 aaPredicted RBP6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 PARP11Q9NR21 331 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 PKHD1P08F94 4074 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 HERC1Q15751 4861 aa6.86□□□□□ -1.31
VPS9D1-205ENST00000565452 A0A0B4J203 849 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 DPPA5A6NC42 116 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 MFNGO00587 321 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 HSPB6O14558 160 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 DIRAS3O95661 229 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 IGHV3-11P01762 117 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 ATF4P18848 351 aaPredicted RBP6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 DTYMKP23919 212 aa6.85□□□□□ -1.31
VPS9D1-205ENST00000565452 IL3RAP26951 378 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms