RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TFF3Q07654 80 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 SLC38A11Q08AI6 406 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 TMEM211Q6ICI0 200 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 IL1F10Q8WWZ1 152 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 RAB40CQ96S21 281 aa13.77□□□□□ -0.21
LINC00554-201ENST00000564841 ALKBH7Q9BT30 221 aaPredicted RBP13.77□□□□□ -0.21
LINC00554-201ENST00000564841 TNFSF11O14788 317 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 PLCXD3Q63HM9 321 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 DHRS13Q6UX07 377 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 ZNF611Q8N823 705 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 Q8N976 141 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 OR5D13Q8NGL4 314 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 SPSB1Q96BD6 273 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 NEIL1Q96FI4 390 aaPredicted RBP13.76□□□□□ -0.21
LINC00554-201ENST00000564841 ABHD14BQ96IU4 210 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 OXGR1Q96P68 337 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 PPP1R3CQ9UQK1 317 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 TRBV20OR9-2A0A075B6H5 130 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 IGHV1-45A0A0A0MS14 117 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 CD300LBA8K4G0 201 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 DIRC3C9JPN6 131 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 NXPH2O95156 264 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 IGKV1-5P01602 117 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 UBE2NP61088 152 aaKnown RBP13.76□□□□□ -0.21
LINC00554-201ENST00000564841 KCNMB1Q16558 191 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 KIAA1644Q3SXP7 199 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 DCAF12Q5T6F0 453 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 APH1AQ96BI3 265 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 LAMTOR2Q9Y2Q5 125 aa13.76□□□□□ -0.21
LINC00554-201ENST00000564841 SIRPB1O00241 398 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 COX6A1P12074 109 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 LCN2P80188 198 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 SPINK9Q5DT21 86 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 RPS19BP1Q86WX3 136 aaKnown RBP13.75□□□□□ -0.21
LINC00554-201ENST00000564841 TECTBQ96PL2 329 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 GAL3ST2Q9H3Q3 398 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 WIPI2Q9Y4P8 454 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 DOCK10Q96BY6 2186 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 HYPMO75409 117 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 BCL3P20749 454 aa13.75□□□□□ -0.21
LINC00554-201ENST00000564841 H0Y980 276 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 CLDN1O95832 211 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 OTX1P32242 354 aaPredicted RBP13.74□□□□□ -0.21
LINC00554-201ENST00000564841 TGFBR3Q03167 851 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 YRDCQ86U90 279 aaKnown RBP13.74□□□□□ -0.21
LINC00554-201ENST00000564841 OR2Y1Q8NGV0 311 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 OR1L1Q8NH94 360 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 ZNF552Q9H707 407 aaPredicted RBP13.74□□□□□ -0.21
LINC00554-201ENST00000564841 CRIM1Q9NZV1 1036 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 NPIPA2E9PIF3 369 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 NPIPA3F8WFD2 350 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 MLNRO43193 412 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 CCNOP22674 350 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 CDKN1BP46527 198 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 CNN3Q15417 329 aaKnown RBP13.74□□□□□ -0.21
LINC00554-201ENST00000564841 KRTCAP3Q53RY4 240 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 ST6GALNAC3Q8NDV1 305 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 PINX1Q96BK5 328 aaKnown RBP13.74□□□□□ -0.21
LINC00554-201ENST00000564841 MRPL18Q9H0U6 180 aaKnown RBP13.74□□□□□ -0.21
LINC00554-201ENST00000564841 USF3Q68DE3 2245 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
LINC00554-201ENST00000564841 B4GALT1P15291 398 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 PMCHP20382 165 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 NTF4P34130 210 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 HBG1P69891 147 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 HBG2P69892 147 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 IGFBP7Q16270 282 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 HLA-DRB5Q30154 266 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 MCEMP1Q8IX19 187 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 STARD4Q96DR4 205 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 CHCHD2Q9Y6H1 151 aaPredicted RBP13.74□□□□□ -0.21
LINC00554-201ENST00000564841 FREM1Q5H8C1 2179 aa13.74□□□□□ -0.21
LINC00554-201ENST00000564841 TRAV38-1A0A0B4J264 116 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 LOC102725191A0A1B0GVB3 256 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 ITGB1BP1O14713 200 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 HS3ST1O14792 307 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 HNRNPA3P51991 378 aaKnown RBP13.73□□□□□ -0.21
LINC00554-201ENST00000564841 SLC35B1P78383 322 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 SPTSSAQ969W0 71 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 A0A0G2JMM0 328 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 A0A1W2PPB8 328 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 A0A1W2PRS3 328 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 KIR3DP1A8MWS1 328 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 CCL2P13500 99 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 IER3P46695 156 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 KLF3P57682 345 aaPredicted RBP13.73□□□□□ -0.21
LINC00554-201ENST00000564841 SUMO1P63165 101 aaKnown RBP13.73□□□□□ -0.21
LINC00554-201ENST00000564841 MRPL52Q86TS9 123 aaKnown RBP13.73□□□□□ -0.21
LINC00554-201ENST00000564841 OR1A1Q9P1Q5 309 aa13.73□□□□□ -0.21
LINC00554-201ENST00000564841 CTXND1A0A1B0GTU2 59 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 CTRLP40313 264 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 PRDX4Q13162 271 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 UBE2V1Q13404 147 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 ASCL4Q6XD76 172 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 LHFPL2Q6ZUX7 228 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 FAM19A2Q8N3H0 131 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 SFRP2Q96HF1 295 aa13.72□□□□□ -0.21
LINC00554-201ENST00000564841 ZNF488Q96MN9 340 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms