RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 Q8N2B8 174 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 Q8N6K4 173 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 C5orf56Q8N8D9 126 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 FLYWCH2Q96CP2 140 aaKnown RBP12.73□□□□□ -0.37
RAB40C-208ENST00000564703 ZNF2Q9BSG1 426 aaPredicted RBP12.73□□□□□ -0.37
RAB40C-208ENST00000564703 SLC5A7Q9GZV3 580 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 SLC35D1Q9NTN3 355 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 MTFP1Q9UDX5 166 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 PRELID3BQ9Y3B1 194 aa12.73□□□□□ -0.37
RAB40C-208ENST00000564703 VSIG10L2P0DP72 767 aa12.72□□□□□ -0.37
RAB40C-208ENST00000564703 F2RL1P55085 397 aa12.72□□□□□ -0.37
RAB40C-208ENST00000564703 SSBP1Q04837 148 aaKnown RBP12.72□□□□□ -0.37
RAB40C-208ENST00000564703 FBLN7Q53RD9 439 aa12.72□□□□□ -0.37
RAB40C-208ENST00000564703 CENPVQ7Z7K6 275 aaPredicted RBP12.72□□□□□ -0.37
RAB40C-208ENST00000564703 PDPNQ86YL7 162 aa12.72□□□□□ -0.37
RAB40C-208ENST00000564703 ZNF383Q8NA42 475 aa12.72□□□□□ -0.37
RAB40C-208ENST00000564703 ZBTB34Q8NCN2 500 aa12.72□□□□□ -0.37
RAB40C-208ENST00000564703 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
RAB40C-208ENST00000564703 LIN7CQ9NUP9 197 aaKnown RBP12.72□□□□□ -0.37
RAB40C-208ENST00000564703 RBMX2Q9Y388 322 aaKnown RBP12.72□□□□□ -0.37
RAB40C-208ENST00000564703 IGKV1D-13A0A0B4J2D9 117 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 CTDSPLO15194 276 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 NBR2O15453 112 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 AMY1AP04745 511 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 AMY2AP04746 511 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 IGKV1-13P0DP09 117 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 PROK1P58294 105 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 TAS2R19P59542 299 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 PLGLAQ15195 96 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 RNASE10Q5GAN6 216 aaKnown RBP12.71□□□□□ -0.37
RAB40C-208ENST00000564703 LPCAT3Q6P1A2 487 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 Q8N9W7 124 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 TSNAXQ99598 290 aaKnown RBP12.71□□□□□ -0.37
RAB40C-208ENST00000564703 HSD17B10Q99714 261 aaKnown RBP12.71□□□□□ -0.37
RAB40C-208ENST00000564703 CCL28Q9NRJ3 127 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 TAS2R8Q9NYW2 309 aa12.71□□□□□ -0.37
RAB40C-208ENST00000564703 SH2D7A6NKC9 451 aaPredicted RBP12.7□□□□□ -0.38
RAB40C-208ENST00000564703 TBPP20226 339 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 S100GP29377 79 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 DUTP33316 252 aaKnown RBP12.7□□□□□ -0.38
RAB40C-208ENST00000564703 LGALS7P47929 136 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 LINC00205P59089 165 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 DGCR2P98153 550 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 MSMO1Q15800 293 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 PYDC2Q56P42 97 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 SPANXN2Q5MJ10 180 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 LIN54Q6MZP7 749 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 Q6ZS46 218 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 SLC35E3Q7Z769 313 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 TMEM229BQ8NBD8 167 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 BVESQ8NE79 360 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 NPBQ8NG41 125 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 SMIM4Q8WVI0 70 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 SERTAD4Q9NUC0 356 aa12.7□□□□□ -0.38
RAB40C-208ENST00000564703 ZNF107Q9UII5 783 aaPredicted RBP12.7□□□□□ -0.38
RAB40C-208ENST00000564703 M0QYG6 137 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 CD3DP04234 171 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 CSF1P09603 554 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 ZNF66Q6ZN08 573 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 KCTD9Q7L273 389 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 CMTM1Q8IZ96 169 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 MFSD4AQ8N468 514 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 KLHDC1Q8N7A1 406 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 TCTEX1D2Q8WW35 142 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 WFDC12Q8WWY7 111 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 MOB3AQ96BX8 217 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
RAB40C-208ENST00000564703 RITA1Q96K30 269 aa12.69□□□□□ -0.38
RAB40C-208ENST00000564703 RRHO14718 337 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 SHOXO15266 292 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 KCNAB3O43448 404 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 GSTZ1O43708 216 aaPredicted RBP12.68□□□□□ -0.38
RAB40C-208ENST00000564703 RAB3DO95716 219 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 IGKV1-16P04430 117 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 PTBP1P26599 531 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAB40C-208ENST00000564703 CATR1Q13166 79 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 VAX1Q5SQQ9 334 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 ZNF660Q6AZW8 331 aaPredicted RBP12.68□□□□□ -0.38
RAB40C-208ENST00000564703 STEAP1BQ6NZ63 245 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 FAM71E2Q8N5Q1 922 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 SOSTQ9BQB4 213 aa12.68□□□□□ -0.38
RAB40C-208ENST00000564703 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 LINC00473A8K010 186 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 FCGR3BO75015 233 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 IGHG2P01859 326 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 CNTFRP26992 372 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 MEF2DQ14814 521 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 C5orf64Q2M2E5 130 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 ARRDC1Q8N5I2 433 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 POC5Q8NA72 575 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 OR6Q1Q8NGQ2 317 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 C5orf30Q96GV9 206 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 THAP7Q9BT49 309 aaPredicted RBP12.67□□□□□ -0.38
RAB40C-208ENST00000564703 GON7Q9BXV9 100 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 FBXL15Q9H469 300 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 BATF3Q9NR55 127 aa12.67□□□□□ -0.38
RAB40C-208ENST00000564703 METTL1Q9UBP6 276 aaKnown RBP12.67□□□□□ -0.38
RAB40C-208ENST00000564703 DISC1C4P0D8 188 aa12.66□□□□□ -0.38
RAB40C-208ENST00000564703 AP4M1O00189 453 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms