RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 IGKV1D-39P04432 117 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 CCL3L1P16619 93 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 IL3RAP26951 378 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 VAMP2P63027 116 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 WDR25Q64LD2 544 aaPredicted RBP12.78□□□□□ -0.36
COMMD4-210ENST00000564587 FOXRED2Q8IWF2 684 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 LYG1Q8N1E2 194 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 ZC4H2Q9NQZ6 224 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
COMMD4-210ENST00000564587 LINC00473A8K010 186 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 F5H0A9 414 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-210ENST00000564587 SLC31A2O15432 143 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 GPR137BO60478 399 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 MMP23AO75900 390 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 IGKV1-5P01602 117 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 RPL12P30050 165 aaKnown RBP12.77□□□□□ -0.37
COMMD4-210ENST00000564587 CDKN1AP38936 164 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 OR4S2Q8NH73 311 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 OR9G1Q8NH87 305 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 PHYHIPLQ96FC7 376 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 RAB40CQ96S21 281 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 AIFM2Q9BRQ8 373 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 SLC25A31Q9H0C2 315 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.37
COMMD4-210ENST00000564587 YLPM1P49750 1951 aaKnown RBP12.77□□□□□ -0.37
COMMD4-210ENST00000564587 DOCK11Q5JSL3 2073 aa12.77□□□□□ -0.37
COMMD4-210ENST00000564587 SAA2-SAA4A0A096LPE2 208 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 PPIAL4CA0A0B4J2A2 164 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 TOR1AO14656 332 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 PROP1O75360 226 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 MED6O75586 246 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 LY86O95711 162 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 LIPFP07098 398 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 SAA2P0DJI9 122 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-210ENST00000564587 PPIAL4GP0DN37 164 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 IGHV1-8P0DP01 117 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 HKR1P10072 659 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 RRASP10301 218 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 GNG10P50151 68 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 RAB14P61106 215 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 ERVK-16P61578 105 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 GNB2P62879 340 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 ZNF816Q0VGE8 651 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-210ENST00000564587 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 DHRS7BQ6IAN0 325 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-210ENST00000564587 H2BFWTQ7Z2G1 175 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 ODF3L1Q8IXM7 274 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 LY6G5BQ8NDX9 201 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 TMEM186Q96B77 213 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 ZNF471Q9BX82 626 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-210ENST00000564587 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-210ENST00000564587 CACNG5Q9UF02 275 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 USF3Q68DE3 2245 aa12.76□□□□□ -0.37
COMMD4-210ENST00000564587 J3QR06 171 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 RAMP3O60896 148 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 FCGR3BO75015 233 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 S1PR2O95136 353 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 P0C879 139 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 NQO2P16083 231 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 EPHA1P21709 976 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 PRRX1P54821 245 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 RPL23AP62750 156 aaKnown RBP12.75□□□□□ -0.37
COMMD4-210ENST00000564587 EXOSC2Q13868 293 aaKnown RBP12.75□□□□□ -0.37
COMMD4-210ENST00000564587 RPL39P5Q59GN2 51 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 ZNF833PQ6ZTB9 187 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 DMBX1Q8NFW5 382 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 STOML3Q8TAV4 291 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 SCARB1Q8WTV0 552 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 IGFBPL1Q8WX77 278 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 DDB2Q92466 427 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 LEAP2Q969E1 77 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 ZNF251Q9BRH9 671 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 TMEM133Q9H2Q1 129 aa12.75□□□□□ -0.37
COMMD4-210ENST00000564587 BARX1Q9HBU1 254 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-210ENST00000564587 A0A0G2JRQ6 117 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 LY6HO94772 140 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 KRASP01116 189 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 IGHV3-7P01780 117 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 TPT1P13693 172 aaKnown RBP12.74□□□□□ -0.37
COMMD4-210ENST00000564587 COX6B1P14854 86 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 PDLIM4P50479 330 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 ZNF137PP52743 207 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 BRWD1-AS2P59051 145 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 TAS2R30P59541 319 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 ERVFRD-1P60508 538 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 RTL8BQ17RB0 113 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 OR2B11Q5JQS5 317 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-210ENST00000564587 OR2C3Q8N628 320 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 OR10X1Q8NGY0 326 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 R3HDM4Q96D70 268 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 SSBP3Q9BWW4 388 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-210ENST00000564587 C11orf1Q9H5F2 150 aa12.74□□□□□ -0.37
COMMD4-210ENST00000564587 LOC105371242A0A075B767 164 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 A0A1W2PPE3 182 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 MARCH11A6NNE9 402 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 M0R1W7 72 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 SYNGR2O43760 224 aa12.73□□□□□ -0.37
COMMD4-210ENST00000564587 HRASP01112 189 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms