RNA–Protein interactions for RNA: ENST00000564216.5

CSK-206, Transcript of C-terminal Src kinase, human

TSL 3

Gene CSK, Length 978 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-206	ENST00000564216	RPS16	P62249	146 aa	Known RBP	12.5	□□□□□ -0.41
CSK-206	ENST00000564216	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.5	□□□□□ -0.41
CSK-206	ENST00000564216	PSG5	Q15238	335 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	RTL8B	Q17RB0	113 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	BEAN1	Q3B7T3	259 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	ZNF562	Q6V9R5	426 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	REC114	Q7Z4M0	266 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	OR13F1	Q8NGS4	319 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	SLC25A46	Q96AG3	418 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	CMTM3	Q96MX0	182 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	FUNDC2	Q9BWH2	189 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	SLC35D1	Q9NTN3	355 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	OR2W1	Q9Y3N9	320 aa		12.5	□□□□□ -0.41
CSK-206	ENST00000564216	TRAV41	A0A0B4J266	112 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216		G3V4G9	280 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	SSX5	O60225	188 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	HLA-DQB1	P01920	261 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	LUM	P51884	338 aa	Predicted RBP	12.49	□□□□□ -0.41
CSK-206	ENST00000564216	CX3CL1	P78423	397 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	UBE2NL	Q5JXB2	153 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	TMEM65	Q6PI78	240 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	HOGA1	Q86XE5	327 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	ZNF645	Q8N7E2	425 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	MINDY2	Q8NBR6	621 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	KLHL30-AS1	Q8NEE0	82 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	MCRIP2	Q9BUT9	160 aa	Known RBP	12.49	□□□□□ -0.41
CSK-206	ENST00000564216	FBXL15	Q9H469	300 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	AUNIP	Q9H7T9	357 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	PARP11	Q9NR21	331 aa		12.49	□□□□□ -0.41
CSK-206	ENST00000564216	ATP6V0E1	O15342	81 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	IGLV1-40	P01703	118 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	RPLP1	P05386	114 aa	Known RBP	12.48	□□□□□ -0.41
CSK-206	ENST00000564216	ARPC4	P59998	168 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	LSM3	P62310	102 aa	Known RBP	12.48	□□□□□ -0.41
CSK-206	ENST00000564216	MSMO1	Q15800	293 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	AKIRIN2	Q53H80	203 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	TMEM177	Q53S58	311 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	PYHIN1	Q6K0P9	492 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	LINC00482	Q8N8I6	264 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	BEST4	Q8NFU0	473 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	MYOZ3	Q8TDC0	251 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	ACOT12	Q8WYK0	555 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	RBMXL1	Q96E39	390 aa	Known RBP	12.48	□□□□□ -0.41
CSK-206	ENST00000564216	UBE2E2	Q96LR5	201 aa		12.48	□□□□□ -0.41
CSK-206	ENST00000564216	METTL1	Q9UBP6	276 aa	Known RBP	12.48	□□□□□ -0.41
CSK-206	ENST00000564216	DUT	P33316	252 aa	Known RBP	12.47	□□□□□ -0.41
CSK-206	ENST00000564216	C8orf86	Q6ZUL3	223 aa		12.47	□□□□□ -0.41
CSK-206	ENST00000564216	PPP1R27	Q86WC6	154 aa		12.47	□□□□□ -0.41
CSK-206	ENST00000564216	C1QL4	Q86Z23	238 aa		12.47	□□□□□ -0.41
CSK-206	ENST00000564216	MRPL41	Q8IXM3	137 aa	Known RBP	12.47	□□□□□ -0.41
CSK-206	ENST00000564216	P2RX4	Q99571	388 aa		12.47	□□□□□ -0.41
CSK-206	ENST00000564216	NUBP2	Q9Y5Y2	271 aa		12.47	□□□□□ -0.41
CSK-206	ENST00000564216	WSB1	Q9Y6I7	421 aa		12.47	□□□□□ -0.41
CSK-206	ENST00000564216		G3V318	75 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	FCN1	O00602	326 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	SHOX	O15266	292 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	TUSC2	O75896	110 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	NFYA	P23511	347 aa	Predicted RBP	12.46	□□□□□ -0.41
CSK-206	ENST00000564216	CD40LG	P29965	261 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	TGFBR1	P36897	503 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	OXLD1	Q5BKU9	147 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	C19orf54	Q5BKX5	351 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	TMEM69	Q5SWH9	247 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	ETV3L	Q6ZN32	361 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	ANKRD13B	Q86YJ7	626 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	SAMD12	Q8N8I0	201 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	OR5M8	Q8NGP6	311 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	OSR1	Q8TAX0	266 aa	Predicted RBP	12.46	□□□□□ -0.41
CSK-206	ENST00000564216	C4orf3	Q8WVX3	66 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	DDB2	Q92466	427 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	HARBI1	Q96MB7	349 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	TMEM68	Q96MH6	324 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	MRPS26	Q9BYN8	205 aa	Known RBP	12.46	□□□□□ -0.41
CSK-206	ENST00000564216	NECAP2	Q9NVZ3	263 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	FOXA2	Q9Y261	457 aa	Predicted RBP	12.46	□□□□□ -0.41
CSK-206	ENST00000564216	VSIG4	Q9Y279	399 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	PRELID3B	Q9Y3B1	194 aa		12.46	□□□□□ -0.41
CSK-206	ENST00000564216	DNAH3	Q8TD57	4116 aa		12.46	□□□□□ -0.42
CSK-206	ENST00000564216	CCL24	O00175	119 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	SLC25A17	O43808	307 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	APOA1	P02647	267 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	RAB9A	P51151	201 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	RORC	P51449	518 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	LINC00205	P59089	165 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	NCS1	P62166	190 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	RUNX1	Q01196	453 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	OVCH2	Q7RTZ1	564 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	TEX45	Q8NA69	505 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	ZBTB34	Q8NCN2	500 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	BVES	Q8NE79	360 aa		12.45	□□□□□ -0.42
CSK-206	ENST00000564216	HSD17B10	Q99714	261 aa	Known RBP	12.45	□□□□□ -0.42
CSK-206	ENST00000564216	ZMAT5	Q9UDW3	170 aa	Known RBP	12.45	□□□□□ -0.42
CSK-206	ENST00000564216	MRPS7	Q9Y2R9	242 aa	Known RBP	12.45	□□□□□ -0.42
CSK-206	ENST00000564216	RBMX2	Q9Y388	322 aa	Known RBP	12.45	□□□□□ -0.42
CSK-206	ENST00000564216	NOTCH1	P46531	2555 aa		12.44	□□□□□ -0.42
CSK-206	ENST00000564216	SMIM31	A0A1B0GVY4	71 aa		12.44	□□□□□ -0.42
CSK-206	ENST00000564216	CREBL2	O60519	120 aa	Predicted RBP	12.44	□□□□□ -0.42
CSK-206	ENST00000564216	GABARAP	O95166	117 aa		12.44	□□□□□ -0.42
CSK-206	ENST00000564216	CA2	P00918	260 aa		12.44	□□□□□ -0.42
CSK-206	ENST00000564216	IGLV2-23	P01705	113 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms