RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 MPV17LQ2QL34 196 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 TMEM30BQ3MIR4 351 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 AKIRIN2Q53H80 203 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 ACTBL2Q562R1 376 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 RPL39P5Q59GN2 51 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 PYHIN1Q6K0P9 492 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 UNQ5815/PRO19632Q6UWF5 114 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 GLDNQ6ZMI3 551 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-204ENST00000563739 Q8N402 240 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 MS4A15Q8N5U1 240 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 MRPL30Q8TCC3 161 aaKnown RBP7.78□□□□□ -1.16
SF3B3-204ENST00000563739 NEURL2Q9BR09 285 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 TUBA4BQ9H853 241 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 TAF9BQ9HBM6 251 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 LRP1BQ9NZR2 4599 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 A0A1W2PPK0 400 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 H0Y980 276 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 H0YJW9 148 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 MAGEB3O15480 346 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 CA2P00918 260 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 CD36P16671 472 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 SERPINA2P20848 420 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 PSMA1P25786 263 aaKnown RBP7.77□□□□□ -1.17
SF3B3-204ENST00000563739 BDKRB2P30411 391 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 LINC00205P59089 165 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 INSL4Q14641 139 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 TRAM1Q15629 374 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 SSX1Q16384 188 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 CD300EQ496F6 205 aaPredicted RBP7.77□□□□□ -1.17
SF3B3-204ENST00000563739 LY6G6FQ5SQ64 297 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 ATAD3CQ5T2N8 411 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 DDI2Q5TDH0 399 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 LCN12Q6JVE5 192 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 LINC00596Q86U02 117 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 PRR18Q8N4B5 295 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 POC5Q8NA72 575 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 DCUN1D5Q9BTE7 237 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 SLA2Q9H6Q3 261 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 SRD5A3Q9H8P0 318 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 RANGRFQ9HD47 186 aaPredicted RBP7.77□□□□□ -1.17
SF3B3-204ENST00000563739 TMEM138Q9NPI0 162 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 ZC4H2Q9NQZ6 224 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 NDUFB11Q9NX14 153 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 JPT1Q9UK76 154 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 DMRT1Q9Y5R6 373 aa7.77□□□□□ -1.17
SF3B3-204ENST00000563739 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 BMPR1BO00238 502 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 SLC22A1O15245 554 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 ST8SIA5O15466 376 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 ZP3P21754 424 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 PSG5Q15238 335 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 HMGN3Q15651 99 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 ACSM3Q53FZ2 586 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF343Q6P1L6 599 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 GTSCR1Q86UQ5 136 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 NKAIN3Q8N8D7 197 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 TMEM203Q969S6 136 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 CLCC1Q96S66 551 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 GPER1Q99527 375 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 METTL9Q9H1A3 318 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 OR2S2Q9NQN1 319 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 ETAA1Q9NY74 926 aa7.76□□□□□ -1.17
SF3B3-204ENST00000563739 APOBP04114 4563 aaKnown RBP7.76□□□□□ -1.17
SF3B3-204ENST00000563739 MSGN1A6NI15 193 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 SPINT2O43291 252 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 YPEL1O60688 119 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 IGLV2-23P01705 113 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 MAS1P04201 325 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 IGKV1-16P04430 117 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 UCHL1P09936 223 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF182P17025 639 aaPredicted RBP7.75□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF93P35789 620 aaPredicted RBP7.75□□□□□ -1.17
SF3B3-204ENST00000563739 FABP5Q01469 135 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 PJVKQ0ZLH3 352 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 SPCS2Q15005 226 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 HSD17B12Q53GQ0 312 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 C6orf183Q5T699 404 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 FAM71F2Q6NXP2 309 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 CEMP1Q6PRD7 247 aaPredicted RBP7.75□□□□□ -1.17
SF3B3-204ENST00000563739 ZNF562Q6V9R5 426 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 TMEM91Q6ZNR0 172 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 CEACAM19Q7Z692 300 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 OR5AN1Q8NGI8 311 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 PHYHIPQ92561 330 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 YPEL2Q96QA6 119 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 AGMATQ9BSE5 352 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 SLC23A1Q9UHI7 598 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 TRAPPC2LQ9UL33 140 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 ING4Q9UNL4 249 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 SELENOKQ9Y6D0 94 aa7.75□□□□□ -1.17
SF3B3-204ENST00000563739 A0A0J9YWU9 116 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 H3BUA1 57 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 SLC25A17O43808 307 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 AIREO43918 545 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 ARL6IP5O75915 188 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 CRYGBP07316 175 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 GADD45AP24522 165 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 HTD2P86397 168 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 SLC22A6Q4U2R8 563 aa7.74□□□□□ -1.17
SF3B3-204ENST00000563739 RAB12Q6IQ22 244 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms