RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 DUTP33316 252 aaKnown RBP13.24□□□□□ -0.29
CLK3-207ENST00000562389 DYRK1AQ13627 763 aa13.24□□□□□ -0.29
CLK3-207ENST00000562389 MSMO1Q15800 293 aa13.24□□□□□ -0.29
CLK3-207ENST00000562389 LYSMD2Q8IV50 215 aa13.24□□□□□ -0.29
CLK3-207ENST00000562389 OR5H2Q8NGV7 314 aa13.24□□□□□ -0.29
CLK3-207ENST00000562389 MCFD2Q8NI22 146 aa13.24□□□□□ -0.29
CLK3-207ENST00000562389 ABHD1Q96SE0 405 aa13.24□□□□□ -0.29
CLK3-207ENST00000562389 SLC35D1Q9NTN3 355 aa13.24□□□□□ -0.29
CLK3-207ENST00000562389 RBMX2Q9Y388 322 aaKnown RBP13.24□□□□□ -0.29
CLK3-207ENST00000562389 PMP2P02689 132 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 IGKV1-16P04430 117 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 RFX2P48378 723 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 MRPS10P82664 201 aaKnown RBP13.23□□□□□ -0.29
CLK3-207ENST00000562389 DHRS11Q6UWP2 260 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 SLC35E3Q7Z769 313 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 DDB2Q92466 427 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 DIRAS2Q96HU8 199 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 DCUN1D5Q9BTE7 237 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 KIAA1456Q9P272 454 aa13.23□□□□□ -0.29
CLK3-207ENST00000562389 TET2Q6N021 2002 aaPredicted RBP13.22□□□□□ -0.29
CLK3-207ENST00000562389 KCNAB3O43448 404 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 SPDEFO95238 335 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 RRASP10301 218 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 HLA-DMAP28067 261 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 HRH1P35367 487 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 EIF4EBP1Q13541 118 aaPredicted RBP13.22□□□□□ -0.29
CLK3-207ENST00000562389 C5orf64Q2M2E5 130 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 ZNF660Q6AZW8 331 aaPredicted RBP13.22□□□□□ -0.29
CLK3-207ENST00000562389 PYHIN1Q6K0P9 492 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 FOXRED2Q8IWF2 684 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 OR52I2Q8NH67 350 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 SGMS2Q8NHU3 365 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 SECTM1Q8WVN6 248 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 FLYWCH2Q96CP2 140 aaKnown RBP13.22□□□□□ -0.29
CLK3-207ENST00000562389 NDUFA13Q9P0J0 144 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 MTFP1Q9UDX5 166 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 A3GALT2U3KPV4 340 aa13.22□□□□□ -0.29
CLK3-207ENST00000562389 LINC00473A8K010 186 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 GABARAPH6UMI1 98 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 RRHO14718 337 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 CTDSPLO15194 276 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 HLA-DRB1P01911 266 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 FXYD4P59646 89 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 HERV-K104P61576 105 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 RPS16P62249 146 aaKnown RBP13.21□□□□□ -0.29
CLK3-207ENST00000562389 CBX3Q13185 183 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 IL18Q14116 193 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 RTL8BQ17RB0 113 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 ACTBL2Q562R1 376 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 RNASE12Q5GAN4 147 aaKnown RBP13.21□□□□□ -0.29
CLK3-207ENST00000562389 ZBTB34Q8NCN2 500 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 FCAMRQ8WWV6 532 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 TSNAXQ99598 290 aaKnown RBP13.21□□□□□ -0.29
CLK3-207ENST00000562389 HSD17B10Q99714 261 aaKnown RBP13.21□□□□□ -0.29
CLK3-207ENST00000562389 HSPB9Q9BQS6 159 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 MMP27Q9H306 513 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 KLK11Q9UBX7 282 aa13.21□□□□□ -0.29
CLK3-207ENST00000562389 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.29
CLK3-207ENST00000562389 AP4M1O00189 453 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 FBXO24O75426 580 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 TNFSF8P32971 234 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 DGCR2P98153 550 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 SSBP1Q04837 148 aaKnown RBP13.2□□□□□ -0.3
CLK3-207ENST00000562389 TMEM177Q53S58 311 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 VAX1Q5SQQ9 334 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 ZNF66Q6ZN08 573 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 KCTD9Q7L273 389 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 CENPVQ7Z7K6 275 aaPredicted RBP13.2□□□□□ -0.3
CLK3-207ENST00000562389 BVESQ8NE79 360 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 OR5AU1Q8NGC0 362 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 CHPT1Q8WUD6 406 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 SMIM4Q8WVI0 70 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 MOB3AQ96BX8 217 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 ZNF2Q9BSG1 426 aaPredicted RBP13.2□□□□□ -0.3
CLK3-207ENST00000562389 SLC5A7Q9GZV3 580 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 CCL28Q9NRJ3 127 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 ZNF580Q9UK33 172 aa13.2□□□□□ -0.3
CLK3-207ENST00000562389 LINC01548A6NM66 108 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 CD28P10747 220 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 TBPP20226 339 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 LGALS7P47929 136 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 RPL30P62888 115 aaKnown RBP13.19□□□□□ -0.3
CLK3-207ENST00000562389 PSG5Q15238 335 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 LIN54Q6MZP7 749 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 TMEM17Q86X19 198 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 STPG2Q8N412 459 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 C11orf44Q8N8P7 122 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 OR6F1Q8NGZ6 308 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 BORCS5Q969J3 196 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 DGCR14Q96DF8 476 aaKnown RBP13.19□□□□□ -0.3
CLK3-207ENST00000562389 HARBI1Q96MB7 349 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 NOL4LQ96MY1 436 aaPredicted RBP13.19□□□□□ -0.3
CLK3-207ENST00000562389 SOSTQ9BQB4 213 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 FBXL15Q9H469 300 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 PRELID3BQ9Y3B1 194 aa13.19□□□□□ -0.3
CLK3-207ENST00000562389 IGHV7-81A0A0B4J1V7 117 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 PSMB11A5LHX3 300 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 DPPA5A6NC42 116 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 M0QZ24 198 aa13.18□□□□□ -0.3
CLK3-207ENST00000562389 IGLV2-23P01705 113 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms