RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ACTA2P62736 377 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 ACTG2P63267 376 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 ACTC1P68032 377 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 ACTA1P68133 377 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 MRPS25P82663 173 aaKnown RBP2.45□□□□□ -2.02
HERC1-215ENST00000561436 CDK6Q00534 326 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 PAX5Q02548 391 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 TMEM183BQ1AE95 376 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 TMEM255AQ5JRV8 349 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 BRD3OSQ6XYD6 125 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 Q6ZR03 302 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 CALHM1Q8IU99 346 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 TMEM183AQ8IXX5 376 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 KIR2DL5AQ8N109 375 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 CLDN22Q8N7P3 220 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 CYB561A3Q8NBI2 242 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 DUSP18Q8NEJ0 188 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 OR1S2Q8NGQ3 325 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 OR10R2Q8NGX6 335 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 KIR2DL5BQ8NHK3 375 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 IL22RA2Q969J5 263 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 PKNOX2Q96KN3 472 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 TMEM109Q9BVC6 243 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 PARP12Q9H0J9 701 aaKnown RBP2.45□□□□□ -2.02
HERC1-215ENST00000561436 HDHD2Q9H0R4 259 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 LGALS13Q9UHV8 139 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 RPUSD1Q9UJJ7 312 aaKnown RBP2.45□□□□□ -2.02
HERC1-215ENST00000561436 ANGPT4Q9Y264 503 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 FIS1Q9Y3D6 152 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 WSB1Q9Y6I7 421 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 U3KQK5 164 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 KMT2CQ8NEZ4 4911 aaKnown RBP2.45□□□□□ -2.02
HERC1-215ENST00000561436 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 SVEP1Q4LDE5 3571 aa2.45□□□□□ -2.02
HERC1-215ENST00000561436 EPPK1P58107 5090 aaKnown RBP2.44□□□□□ -2.02
HERC1-215ENST00000561436 SCN2AQ99250 2005 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 IGHV3-64DA0A0J9YX35 117 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 MDFIC2A0A1B0GVS7 189 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 LYRM9A8MSI8 78 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 F6UB75 175 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 SIRPB1O00241 398 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 NDUFB3O43676 98 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 ANGPTL7O43827 346 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 OR5F1O95221 314 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 RBP4P02753 201 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 IFNW1P05000 195 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 CFL1P23528 166 aaKnown RBP2.44□□□□□ -2.02
HERC1-215ENST00000561436 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 CDKN2CP42773 168 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 CXCL5P42830 114 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 RPS10P46783 165 aaKnown RBP2.44□□□□□ -2.02
HERC1-215ENST00000561436 TGM4P49221 684 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 POLR2JP52435 117 aaKnown RBP2.44□□□□□ -2.02
HERC1-215ENST00000561436 SLC18A1P54219 525 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 PRRX1P54821 245 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 CAV3P56539 151 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 HIST1H3AP68431 136 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 GLO1Q04760 184 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 RPL18Q07020 188 aaKnown RBP2.44□□□□□ -2.02
HERC1-215ENST00000561436 STX3Q13277 289 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 ENDOGQ14249 297 aaKnown RBP2.44□□□□□ -2.02
HERC1-215ENST00000561436 GUCA2BQ16661 112 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 DEFB121Q5J5C9 76 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 CLEC12AQ5QGZ9 265 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 HIST2H3PS2Q5TEC6 136 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 C22orf42Q6IC83 251 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 DNM1P34Q6PK57 102 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 HIST2H3AQ71DI3 136 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 OLIG3Q7RTU3 272 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 LINC01551Q86U37 167 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 ENTHD1Q8IYW4 607 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 LRRC18Q8N456 261 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 OR51D1Q8NGF3 324 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 OR4A4PQ8NGN8 299 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 OR5K1Q8NHB7 308 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 ZNF502Q8TBZ5 544 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 TCP10LQ8TDR4 215 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 GTF2H4Q92759 462 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 FAM3DQ96BQ1 224 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 MALSU1Q96EH3 234 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 SGTBQ96EQ0 304 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 RNF185Q96GF1 192 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 SLC29A1Q99808 456 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 IFI27L2Q9H2X8 130 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 MED31Q9Y3C7 131 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 TSSC4Q9Y5U2 329 aaPredicted RBP2.44□□□□□ -2.02
HERC1-215ENST00000561436 RYR1P21817 5038 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 USF3Q68DE3 2245 aa2.44□□□□□ -2.02
HERC1-215ENST00000561436 IGKV1D-13A0A0B4J2D9 117 aa2.43□□□□□ -2.02
HERC1-215ENST00000561436 PANO1I0J062 215 aa2.43□□□□□ -2.02
HERC1-215ENST00000561436 K7EIL1 84 aa2.43□□□□□ -2.02
HERC1-215ENST00000561436 M0QZK8 103 aa2.43□□□□□ -2.02
HERC1-215ENST00000561436 NDUFAB1O14561 156 aa2.43□□□□□ -2.02
HERC1-215ENST00000561436 UBDO15205 165 aa2.43□□□□□ -2.02
HERC1-215ENST00000561436 MRPS12O15235 138 aaKnown RBP2.43□□□□□ -2.02
HERC1-215ENST00000561436 SPAG7O75391 227 aa2.43□□□□□ -2.02
HERC1-215ENST00000561436 CYB5R3P00387 301 aaPredicted RBP2.43□□□□□ -2.02
HERC1-215ENST00000561436 NPPAP01160 153 aa2.43□□□□□ -2.02
HERC1-215ENST00000561436 APOC1P02654 83 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms