RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TTTY10Q9BZA0 68 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 MAP6D1Q9H9H5 199 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 S100A14Q9HCY8 104 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 PPP1R14DQ9NXH3 145 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 NKIRAS1Q9NYS0 192 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 MDFICQ9P1T7 246 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 MBD2Q9UBB5 411 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 GNG12Q9UBI6 72 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 BAIAP2Q9UQB8 552 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
HERC1-213ENST00000561359 DEFB131BA0A096LNP1 70 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 TRAV24A0A0B4J272 114 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 IGKV1-12A0A0C4DH73 117 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 MPTX1A8MV57 137 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 MRASO14807 208 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 SYT7O43581 403 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 IGKV1D-12P01611 117 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 CD1AP06126 327 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 CBLN1P23435 193 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 LGALS7P47929 136 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 ZNF134P52741 427 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 RPS7P62081 194 aaKnown RBP3.84□□□□□ -1.79
HERC1-213ENST00000561359 MRPS15P82914 257 aaKnown RBP3.84□□□□□ -1.79
HERC1-213ENST00000561359 RELQ04864 619 aaPredicted RBP3.84□□□□□ -1.79
HERC1-213ENST00000561359 FXYD3Q14802 87 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 ODF1Q14990 250 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 CDK5R1Q15078 307 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 CT45A1Q5HYN5 189 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 OGFRL1Q5TC84 451 aaPredicted RBP3.84□□□□□ -1.79
HERC1-213ENST00000561359 ZNF562Q6V9R5 426 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 ZNF767PQ75MW2 155 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 ZNF679Q8IYX0 411 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 LYPD1Q8N2G4 141 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 PRR18Q8N4B5 295 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 OR2C3Q8N628 320 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 UXS1Q8NBZ7 420 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 OR5D18Q8NGL1 313 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 OR5B3Q8NH48 314 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 CT45A3Q8NHU0 189 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 PLPPR1Q8TBJ4 325 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 ENKURQ8TC29 256 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 GALNT14Q96FL9 552 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 C7orf34Q96L11 122 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 CHST5Q9GZS9 411 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 C6orf62Q9GZU0 229 aaPredicted RBP3.84□□□□□ -1.79
HERC1-213ENST00000561359 CSTL1Q9H114 145 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 HRH4Q9H3N8 390 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 MOB1AQ9H8S9 216 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 IL1RAPQ9NPH3 570 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 CMC2Q9NRP2 79 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 COA4Q9NYJ1 87 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 MLXQ9UH92 298 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 OR52A1Q9UKL2 312 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 AP3M1Q9Y2T2 418 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 AP4S1Q9Y587 144 aa3.84□□□□□ -1.79
HERC1-213ENST00000561359 ZNF320A2RRD8 509 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 C15orf65H3BRN8 121 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 KDM4BO94953 1096 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 SOX14O95416 240 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 CA2P00918 260 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 NPPAP01160 153 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 IGLV2-14P01704 120 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 HLA-AP01891 365 aaKnown RBP3.83□□□□□ -1.8
HERC1-213ENST00000561359 DCKP27707 260 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 MAP2K4P45985 399 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 OR3A3P47888 321 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 KCNJ3P48549 501 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 AQP4P55087 323 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 SSTP61278 116 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 CD300CQ08708 224 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 EXOSC2Q13868 293 aaKnown RBP3.83□□□□□ -1.8
HERC1-213ENST00000561359 ZNF846Q147U1 533 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 MICAQ29983 383 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 Q3ZCU0 254 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 IGSF11Q5DX21 431 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 BTNL8Q6UX41 500 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 FAM131AQ6UXB0 335 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 PLEKHG7Q6ZR37 379 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 Q6ZSR3 168 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 RASSF6Q6ZTQ3 369 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 AKAP14Q86UN6 197 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 CDH26Q8IXH8 852 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 LINC00518Q8N0U6 118 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 ZNF439Q8NDP4 499 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 OR9Q2Q8NGE9 314 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 OR13C5Q8NGS8 318 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 CNIH3Q8TBE1 160 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 NTN5Q8WTR8 489 aaPredicted RBP3.83□□□□□ -1.8
HERC1-213ENST00000561359 CCDC107Q8WV48 283 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 ASB17Q8WXJ9 295 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 CHRDL1Q9BU40 450 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 ARL8BQ9NVJ2 186 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 METTL1Q9UBP6 276 aaKnown RBP3.83□□□□□ -1.8
HERC1-213ENST00000561359 ING4Q9UNL4 249 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 RBMX2Q9Y388 322 aaKnown RBP3.83□□□□□ -1.8
HERC1-213ENST00000561359 R4GMQ9 66 aa3.83□□□□□ -1.8
HERC1-213ENST00000561359 TRAV6A0A075B6T7 132 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 TRAV25A0A0B4J276 109 aa3.82□□□□□ -1.8
HERC1-213ENST00000561359 IGKV1-9A0A0C4DH69 117 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms