RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 C6orf201Q7Z4U5 140 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF554Q86TJ5 538 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 CLVS1Q8IUQ0 354 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 OR4M1Q8NGD0 313 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 OR5D13Q8NGL4 314 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 MRPL30Q8TCC3 161 aaKnown RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 RAB2BQ8WUD1 216 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 ARHGAP5-AS1Q96IT6 56 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 SLIRPQ9GZT3 109 aaKnown RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 ABCG5Q9H222 651 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 DCSTAMPQ9H295 470 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 SPACA1Q9HBV2 294 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 YAE1D1Q9NRH1 226 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 KIF25Q9UIL4 384 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 ELF5Q9UKW6 265 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 RAB22AQ9UL26 194 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 SPATA2Q9UM82 520 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 PEX16Q9Y5Y5 336 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 AUP1Q9Y679 476 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 TRAV39A0A0B4J263 110 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 CENPVL3A0A0U1RRI6 287 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 ODF3BA8MYP8 253 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 CA11O75493 328 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 MELTFP08582 738 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 HIST1H1DP16402 221 aaKnown RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 RCC1P18754 421 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 CD34P28906 385 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 BLVRBP30043 206 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 VEGFCP49767 419 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 PRB3Q04118 309 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 SCN1BQ07699 218 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 EDDM3AQ14507 147 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 IDNKQ5T6J7 187 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 PRR27Q6MZM9 219 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 FAHD2BQ6P2I3 314 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 HEPN1Q6WQI6 88 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 IL17RELQ6ZVW7 336 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 USP43Q70EL4 1123 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 GDPD3Q7L5L3 318 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 C5orf24Q7Z6I8 188 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 CROCCP3Q8IVE0 287 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 OR10R2Q8NGX6 335 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 H1FXQ92522 213 aaKnown RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 MOB3AQ96BX8 217 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 FAHD2AQ96GK7 314 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 S100A13Q99584 98 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 HDHD3Q9BSH5 251 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 URM1Q9BTM9 101 aaKnown RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 FAAP24Q9BTP7 215 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 PECRQ9BY49 303 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 NXF2Q9GZY0 626 aaKnown RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 MMP28Q9H239 520 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 MIXL1Q9H2W2 232 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 METTL8Q9H825 291 aaKnown RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 RHBDL2Q9NX52 303 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 TAS2R3Q9NYW6 316 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 ABRACLQ9P1F3 81 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 GLS2Q9UI32 602 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 AK3Q9UIJ7 227 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 ETV7Q9Y603 341 aa4.78□□□□□ -1.64
LRRC28-220ENST00000561253 SOX21Q9Y651 276 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-220ENST00000561253 MGAM2Q2M2H8 2515 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 PKD1L1Q8TDX9 2849 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 MEIKINA0A087WXM9 373 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 A0A0A6YYH2 397 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 IGKV1-6A0A0C4DH72 117 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 KBTBD11-OT1A0A1B0GTJ5 212 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 A0A1W2PPQ1 181 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 hADV38S2A0JD32 116 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 TMEM30CPA0ZSE6 113 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 A6NJ64 397 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 C12orf77C9JDV5 145 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 SSX5O60225 188 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 IGLV1-47P01700 117 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 EIF4EP06730 217 aaKnown RBP4.77□□□□□ -1.65
LRRC28-220ENST00000561253 PRSS1P07477 247 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 IGHV1-8P0DP01 117 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 GNB3P16520 340 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 CDK2P24941 298 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 SSTR5P35346 364 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 EDDM3BP56851 147 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 KLRD1Q13241 179 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 HMGN3Q15651 99 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 ATAD3CQ5T2N8 411 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 FAM53AQ6NSI3 398 aaPredicted RBP4.77□□□□□ -1.65
LRRC28-220ENST00000561253 BTNL3Q6UXE8 466 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 VMO1Q7Z5L0 202 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 SMIM29Q86T20 159 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 OR11H6Q8NGC7 330 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 OR56B1Q8NGI3 324 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF596Q8TC21 504 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 RAB3CQ96E17 227 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF714Q96N38 554 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 UHRF2Q96PU4 802 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 SOSTQ9BQB4 213 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 Q9N2K0 584 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 SIRT7Q9NRC8 400 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 CALYQ9NYX4 217 aa4.77□□□□□ -1.65
LRRC28-220ENST00000561253 CCDC59Q9P031 241 aaKnown RBP4.77□□□□□ -1.65
LRRC28-220ENST00000561253 RNF150Q9ULK6 438 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms